RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
PKNOX1-206ENST00000480179 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
PKNOX1-206ENST00000480179 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
PKNOX1-206ENST00000480179 CUL7Q14999 1698 aa22.71■■□□□ 1.23
PKNOX1-206ENST00000480179 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
PKNOX1-206ENST00000480179 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
PKNOX1-206ENST00000480179 VPS8Q8N3P4 1428 aa22.7■■□□□ 1.22
PKNOX1-206ENST00000480179 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
PKNOX1-206ENST00000480179 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
PKNOX1-206ENST00000480179 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
PKNOX1-206ENST00000480179 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.22
PKNOX1-206ENST00000480179 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
PKNOX1-206ENST00000480179 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
PKNOX1-206ENST00000480179 HRCP23327 699 aa22.57■■□□□ 1.2
PKNOX1-206ENST00000480179 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
PKNOX1-206ENST00000480179 PBRM1Q86U86 1689 aa22.57■■□□□ 1.2
PKNOX1-206ENST00000480179 CTTNBP2Q8WZ74 1663 aa22.54■■□□□ 1.2
PKNOX1-206ENST00000480179 APLP2Q06481 763 aa22.48■■□□□ 1.19
PKNOX1-206ENST00000480179 ADAMTS12P58397 1594 aa22.43■■□□□ 1.18
PKNOX1-206ENST00000480179 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
PKNOX1-206ENST00000480179 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
PKNOX1-206ENST00000480179 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
PKNOX1-206ENST00000480179 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
PKNOX1-206ENST00000480179 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
PKNOX1-206ENST00000480179 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
PKNOX1-206ENST00000480179 NUP160Q12769 1436 aa22.3■■□□□ 1.16
PKNOX1-206ENST00000480179 SAMD9Q5K651 1589 aa22.27■■□□□ 1.16
PKNOX1-206ENST00000480179 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
PKNOX1-206ENST00000480179 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
PKNOX1-206ENST00000480179 TIAM1Q13009 1591 aa22.24■■□□□ 1.15
PKNOX1-206ENST00000480179 IQGAP2Q13576 1575 aa22.22■■□□□ 1.15
PKNOX1-206ENST00000480179 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
PKNOX1-206ENST00000480179 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
PKNOX1-206ENST00000480179 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
PKNOX1-206ENST00000480179 FYCO1Q9BQS8 1478 aa22.18■■□□□ 1.14
PKNOX1-206ENST00000480179 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
PKNOX1-206ENST00000480179 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
PKNOX1-206ENST00000480179 FMN1Q68DA7 1419 aa22.16■■□□□ 1.14
PKNOX1-206ENST00000480179 CASKIN1Q8WXD9 1431 aa22.16■■□□□ 1.14
PKNOX1-206ENST00000480179 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
PKNOX1-206ENST00000480179 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
PKNOX1-206ENST00000480179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
PKNOX1-206ENST00000480179 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
PKNOX1-206ENST00000480179 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
PKNOX1-206ENST00000480179 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
PKNOX1-206ENST00000480179 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
PKNOX1-206ENST00000480179 KIAA0586Q9BVV6 1533 aa22.07■■□□□ 1.12
PKNOX1-206ENST00000480179 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
PKNOX1-206ENST00000480179 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
PKNOX1-206ENST00000480179 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
PKNOX1-206ENST00000480179 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
PKNOX1-206ENST00000480179 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
PKNOX1-206ENST00000480179 KIAA0556O60303 1618 aa22■■□□□ 1.11
PKNOX1-206ENST00000480179 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
PKNOX1-206ENST00000480179 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
PKNOX1-206ENST00000480179 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
PKNOX1-206ENST00000480179 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
PKNOX1-206ENST00000480179 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
PKNOX1-206ENST00000480179 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
PKNOX1-206ENST00000480179 MTUS2Q5JR59 1369 aa21.9■■□□□ 1.1
PKNOX1-206ENST00000480179 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
PKNOX1-206ENST00000480179 KIF13AQ9H1H9 1805 aa21.86■■□□□ 1.09
PKNOX1-206ENST00000480179 ABCC10Q5T3U5 1492 aa21.86■■□□□ 1.09
PKNOX1-206ENST00000480179 EPRSP07814 1512 aaKnown RBP21.85■■□□□ 1.09
PKNOX1-206ENST00000480179 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
PKNOX1-206ENST00000480179 CDK13Q14004 1512 aaKnown RBP21.84■■□□□ 1.09
PKNOX1-206ENST00000480179 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
PKNOX1-206ENST00000480179 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.08
PKNOX1-206ENST00000480179 ITGAEP38570 1179 aa21.83■■□□□ 1.08
PKNOX1-206ENST00000480179 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.08
PKNOX1-206ENST00000480179 PTPRGP23470 1445 aa21.82■■□□□ 1.08
PKNOX1-206ENST00000480179 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
PKNOX1-206ENST00000480179 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
PKNOX1-206ENST00000480179 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
PKNOX1-206ENST00000480179 FAM50AQ14320 339 aaKnown RBP21.8■■□□□ 1.08
PKNOX1-206ENST00000480179 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
PKNOX1-206ENST00000480179 NUP153P49790 1475 aaKnown RBP21.76■■□□□ 1.07
PKNOX1-206ENST00000480179 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
PKNOX1-206ENST00000480179 DIP2BQ9P265 1576 aa21.74■■□□□ 1.07
PKNOX1-206ENST00000480179 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
PKNOX1-206ENST00000480179 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
PKNOX1-206ENST00000480179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■■□□ 18.4
PKNOX1-206ENST00000480179 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
PKNOX1-206ENST00000480179 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
PKNOX1-206ENST00000480179 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.05
PKNOX1-206ENST00000480179 ABCA8O94911 1581 aa21.64■■□□□ 1.05
PKNOX1-206ENST00000480179 KDM6BO15054 1643 aa21.63■■□□□ 1.05
PKNOX1-206ENST00000480179 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
PKNOX1-206ENST00000480179 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
PKNOX1-206ENST00000480179 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
PKNOX1-206ENST00000480179 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
PKNOX1-206ENST00000480179 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
PKNOX1-206ENST00000480179 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
PKNOX1-206ENST00000480179 CDK11AQ9UQ88 783 aaPredicted RBP21.57■■□□□ 1.04
PKNOX1-206ENST00000480179 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
PKNOX1-206ENST00000480179 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
PKNOX1-206ENST00000480179 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
PKNOX1-206ENST00000480179 KIF14Q15058 1648 aa21.52■■□□□ 1.04
PKNOX1-206ENST00000480179 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
PKNOX1-206ENST00000480179 GLI2P10070 1586 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms