RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
CCDC58-205ENST00000479899 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
CCDC58-205ENST00000479899 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
CCDC58-205ENST00000479899 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
CCDC58-205ENST00000479899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCDC58-205ENST00000479899 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
CCDC58-205ENST00000479899 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
CCDC58-205ENST00000479899 ABCA5Q8WWZ7 1642 aa19.57■□□□□ 0.72
CCDC58-205ENST00000479899 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
CCDC58-205ENST00000479899 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
CCDC58-205ENST00000479899 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
CCDC58-205ENST00000479899 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
CCDC58-205ENST00000479899 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
CCDC58-205ENST00000479899 FOXD4L1Q9NU39 408 aa19.43■□□□□ 0.7
CCDC58-205ENST00000479899 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
CCDC58-205ENST00000479899 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
CCDC58-205ENST00000479899 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
CCDC58-205ENST00000479899 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
CCDC58-205ENST00000479899 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
CCDC58-205ENST00000479899 ZBTB22O15209 634 aa19.36■□□□□ 0.69
CCDC58-205ENST00000479899 RNF39Q9H2S5 420 aa19.36■□□□□ 0.69
CCDC58-205ENST00000479899 NUP160Q12769 1436 aa19.35■□□□□ 0.69
CCDC58-205ENST00000479899 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
CCDC58-205ENST00000479899 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
CCDC58-205ENST00000479899 U3KPZ7 1027 aaPredicted RBP19.28■□□□□ 0.68
CCDC58-205ENST00000479899 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
CCDC58-205ENST00000479899 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
CCDC58-205ENST00000479899 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
CCDC58-205ENST00000479899 PRG4Q92954 1404 aaPredicted RBP19.22■□□□□ 0.67
CCDC58-205ENST00000479899 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
CCDC58-205ENST00000479899 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
CCDC58-205ENST00000479899 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
CCDC58-205ENST00000479899 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
CCDC58-205ENST00000479899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.09■□□□□ 0.65
CCDC58-205ENST00000479899 HNRNPUL2Q1KMD3 747 aaKnown RBP19.09■□□□□ 0.65
CCDC58-205ENST00000479899 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
CCDC58-205ENST00000479899 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC58-205ENST00000479899 FAM69CQ0P6D2 419 aa19.05■□□□□ 0.64
CCDC58-205ENST00000479899 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
CCDC58-205ENST00000479899 ABCC10Q5T3U5 1492 aa19.04■□□□□ 0.64
CCDC58-205ENST00000479899 MAPKBP1O60336 1514 aa19.04■□□□□ 0.64
CCDC58-205ENST00000479899 CUL7Q14999 1698 aa19.01■□□□□ 0.63
CCDC58-205ENST00000479899 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
CCDC58-205ENST00000479899 TSPOAP1O95153 1857 aa19■□□□□ 0.63
CCDC58-205ENST00000479899 KDM6BO15054 1643 aa18.98■□□□□ 0.63
CCDC58-205ENST00000479899 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
CCDC58-205ENST00000479899 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
CCDC58-205ENST00000479899 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
CCDC58-205ENST00000479899 IGF1RP08069 1367 aa18.93■□□□□ 0.62
CCDC58-205ENST00000479899 APLP2Q06481 763 aa18.91■□□□□ 0.62
CCDC58-205ENST00000479899 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
CCDC58-205ENST00000479899 PTPRGP23470 1445 aa18.86■□□□□ 0.61
CCDC58-205ENST00000479899 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
CCDC58-205ENST00000479899 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
CCDC58-205ENST00000479899 CARMIL2Q6F5E8 1435 aa18.82■□□□□ 0.6
CCDC58-205ENST00000479899 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
CCDC58-205ENST00000479899 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
CCDC58-205ENST00000479899 ATXN8OSP0DMR3 200 aa18.8■□□□□ 0.6
CCDC58-205ENST00000479899 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
CCDC58-205ENST00000479899 ASXL2Q76L83 1435 aa18.78■□□□□ 0.6
CCDC58-205ENST00000479899 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
CCDC58-205ENST00000479899 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
CCDC58-205ENST00000479899 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
CCDC58-205ENST00000479899 GLI2P10070 1586 aa18.72■□□□□ 0.59
CCDC58-205ENST00000479899 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
CCDC58-205ENST00000479899 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
CCDC58-205ENST00000479899 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
CCDC58-205ENST00000479899 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.58
CCDC58-205ENST00000479899 CAPN15O75808 1086 aa18.69■□□□□ 0.58
CCDC58-205ENST00000479899 KIAA0556O60303 1618 aa18.68■□□□□ 0.58
CCDC58-205ENST00000479899 MAP3K4Q9Y6R4 1608 aa18.67■□□□□ 0.58
CCDC58-205ENST00000479899 ADGRL1O94910 1474 aa18.66■□□□□ 0.58
CCDC58-205ENST00000479899 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
CCDC58-205ENST00000479899 EPRSP07814 1512 aaKnown RBP18.66■□□□□ 0.58
CCDC58-205ENST00000479899 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
CCDC58-205ENST00000479899 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.58
CCDC58-205ENST00000479899 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
CCDC58-205ENST00000479899 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
CCDC58-205ENST00000479899 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
CCDC58-205ENST00000479899 COL17A1Q9UMD9 1497 aaPredicted RBP18.61■□□□□ 0.57
CCDC58-205ENST00000479899 TEX14Q8IWB6 1497 aa18.6■□□□□ 0.57
CCDC58-205ENST00000479899 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
CCDC58-205ENST00000479899 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
CCDC58-205ENST00000479899 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
CCDC58-205ENST00000479899 ILDR1Q86SU0 546 aaPredicted RBP18.49■□□□□ 0.55
CCDC58-205ENST00000479899 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
CCDC58-205ENST00000479899 ABCA8O94911 1581 aa18.48■□□□□ 0.55
CCDC58-205ENST00000479899 KCNH8Q96L42 1107 aa18.47■□□□□ 0.55
CCDC58-205ENST00000479899 CD109Q6YHK3 1445 aa18.46■□□□□ 0.55
CCDC58-205ENST00000479899 KIF21BO75037 1637 aa18.44■□□□□ 0.54
CCDC58-205ENST00000479899 ARID3CA6NKF2 412 aa18.43■□□□□ 0.54
CCDC58-205ENST00000479899 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
CCDC58-205ENST00000479899 DSG3P32926 999 aa18.4■□□□□ 0.54
CCDC58-205ENST00000479899 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
CCDC58-205ENST00000479899 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
CCDC58-205ENST00000479899 ABCB7O75027 752 aa18.3■□□□□ 0.52
CCDC58-205ENST00000479899 ATP10BO94823 1461 aa18.3■□□□□ 0.52
CCDC58-205ENST00000479899 ABCA9Q8IUA7 1624 aa18.3■□□□□ 0.52
CCDC58-205ENST00000479899 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
CCDC58-205ENST00000479899 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms