RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 CCDC88BA6NC98 1476 aa7.54□□□□□ -1.2
COPS7B-220ENST00000479430 TDRD9Q8NDG6 1382 aaKnown RBP7.52□□□□□ -1.21
COPS7B-220ENST00000479430 U3KPZ7 1027 aaPredicted RBP7.52□□□□□ -1.21
COPS7B-220ENST00000479430 ERCC6L2Q5T890 1561 aa7.51□□□□□ -1.21
COPS7B-220ENST00000479430 SAMD1Q6SPF0 538 aaPredicted RBP7.51□□□□□ -1.21
COPS7B-220ENST00000479430 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
COPS7B-220ENST00000479430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.5□□□□□ -1.21
COPS7B-220ENST00000479430 HNRNPUL2Q1KMD3 747 aaKnown RBP7.5□□□□□ -1.21
COPS7B-220ENST00000479430 SNAPC4Q5SXM2 1469 aa7.49□□□□□ -1.21
COPS7B-220ENST00000479430 POLA1P09884 1462 aaPredicted RBP7.49□□□□□ -1.21
COPS7B-220ENST00000479430 CLASP1Q7Z460 1538 aa7.48□□□□□ -1.21
COPS7B-220ENST00000479430 ZNF219Q9P2Y4 722 aaPredicted RBP7.48□□□□□ -1.21
COPS7B-220ENST00000479430 KIF13AQ9H1H9 1805 aa7.48□□□□□ -1.21
COPS7B-220ENST00000479430 PBRM1Q86U86 1689 aa7.46□□□□□ -1.22
COPS7B-220ENST00000479430 TSPOAP1O95153 1857 aa7.45□□□□□ -1.22
COPS7B-220ENST00000479430 CHMP7Q8WUX9 453 aaPredicted RBP7.45□□□□□ -1.22
COPS7B-220ENST00000479430 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
COPS7B-220ENST00000479430 ILDR1Q86SU0 546 aaPredicted RBP7.44□□□□□ -1.22
COPS7B-220ENST00000479430 SOGA1O94964 1423 aa7.44□□□□□ -1.22
COPS7B-220ENST00000479430 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
COPS7B-220ENST00000479430 SYNJ1O43426 1573 aa7.43□□□□□ -1.22
COPS7B-220ENST00000479430 FBXO3Q9UK99 471 aa7.43□□□□□ -1.22
COPS7B-220ENST00000479430 FGD5Q6ZNL6 1462 aa7.43□□□□□ -1.22
COPS7B-220ENST00000479430 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
COPS7B-220ENST00000479430 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
COPS7B-220ENST00000479430 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
COPS7B-220ENST00000479430 CUX1P39880 1505 aa7.39□□□□□ -1.23
COPS7B-220ENST00000479430 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
COPS7B-220ENST00000479430 KDM4FA0A1W2PPD8 638 aa7.37□□□□□ -1.23
COPS7B-220ENST00000479430 HAP1P54257 671 aaPredicted RBP7.37□□□□□ -1.23
COPS7B-220ENST00000479430 SYNJ2O15056 1496 aa7.36□□□□□ -1.23
COPS7B-220ENST00000479430 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
COPS7B-220ENST00000479430 GRIN2BQ13224 1484 aa7.36□□□□□ -1.23
COPS7B-220ENST00000479430 VASPP50552 380 aaPredicted RBP7.35□□□□□ -1.23
COPS7B-220ENST00000479430 IFNLR1Q8IU57 520 aaPredicted RBP7.35□□□□□ -1.23
COPS7B-220ENST00000479430 MAGI1Q96QZ7 1491 aaPredicted RBP7.35□□□□□ -1.23
COPS7B-220ENST00000479430 PROM2Q8N271 834 aa7.34□□□□□ -1.23
COPS7B-220ENST00000479430 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
COPS7B-220ENST00000479430 ABCA5Q8WWZ7 1642 aa7.32□□□□□ -1.24
COPS7B-220ENST00000479430 PRKCSHP14314 528 aaPredicted RBP7.32□□□□□ -1.24
COPS7B-220ENST00000479430 FAM69CQ0P6D2 419 aa7.32□□□□□ -1.24
COPS7B-220ENST00000479430 PKD2Q13563 968 aa7.3□□□□□ -1.24
COPS7B-220ENST00000479430 KDM6BO15054 1643 aa7.29□□□□□ -1.24
COPS7B-220ENST00000479430 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
COPS7B-220ENST00000479430 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
COPS7B-220ENST00000479430 SHROOM2Q13796 1616 aa7.28□□□□□ -1.24
COPS7B-220ENST00000479430 APLP2Q06481 763 aa7.27□□□□□ -1.25
COPS7B-220ENST00000479430 DIP2BQ9P265 1576 aa7.27□□□□□ -1.25
COPS7B-220ENST00000479430 PRG4Q92954 1404 aaPredicted RBP7.27□□□□□ -1.25
COPS7B-220ENST00000479430 ADCY10Q96PN6 1610 aa7.26□□□□□ -1.25
COPS7B-220ENST00000479430 BCANQ96GW7 911 aa7.25□□□□□ -1.25
COPS7B-220ENST00000479430 ABCA10Q8WWZ4 1543 aa7.24□□□□□ -1.25
COPS7B-220ENST00000479430 NUP160Q12769 1436 aa7.24□□□□□ -1.25
COPS7B-220ENST00000479430 PPRC1Q5VV67 1664 aaKnown RBP7.23□□□□□ -1.25
COPS7B-220ENST00000479430 POLA2Q14181 598 aa7.23□□□□□ -1.25
COPS7B-220ENST00000479430 VSIG10Q8N0Z9 540 aa7.23□□□□□ -1.25
COPS7B-220ENST00000479430 HECW2Q9P2P5 1572 aa7.23□□□□□ -1.25
COPS7B-220ENST00000479430 ABCC10Q5T3U5 1492 aa7.23□□□□□ -1.25
COPS7B-220ENST00000479430 ADGRL1O94910 1474 aa7.22□□□□□ -1.25
COPS7B-220ENST00000479430 JPH4Q96JJ6 628 aa7.21□□□□□ -1.26
COPS7B-220ENST00000479430 SPINK5Q9NQ38 1064 aaPredicted RBP7.21□□□□□ -1.26
COPS7B-220ENST00000479430 TAOK2Q9UL54 1235 aa7.21□□□□□ -1.26
COPS7B-220ENST00000479430 CUL7Q14999 1698 aa7.2□□□□□ -1.26
COPS7B-220ENST00000479430 KDM2AQ9Y2K7 1162 aa7.2□□□□□ -1.26
COPS7B-220ENST00000479430 RUSC2Q8N2Y8 1516 aa7.19□□□□□ -1.26
COPS7B-220ENST00000479430 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPS7B-220ENST00000479430 SUPT5HO00267 1087 aaKnown RBP7.18□□□□□ -1.26
COPS7B-220ENST00000479430 BIVM-ERCC5R4GMW8 1640 aa7.18□□□□□ -1.26
COPS7B-220ENST00000479430 FHAD1B1AJZ9 1412 aa7.18□□□□□ -1.26
COPS7B-220ENST00000479430 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
COPS7B-220ENST00000479430 MAPKBP1O60336 1514 aa7.16□□□□□ -1.26
COPS7B-220ENST00000479430 WRNQ14191 1432 aaPredicted RBP eCLIP7.15□□□□□ -1.27
COPS7B-220ENST00000479430 TOP2BQ02880 1626 aa7.15□□□□□ -1.27
COPS7B-220ENST00000479430 PAXIP1Q6ZW49 1069 aaPredicted RBP7.14□□□□□ -1.27
COPS7B-220ENST00000479430 KLHL34Q8N239 644 aa7.14□□□□□ -1.27
COPS7B-220ENST00000479430 BBXQ8WY36 941 aaPredicted RBP7.14□□□□□ -1.27
COPS7B-220ENST00000479430 ECM2O94769 699 aaPredicted RBP7.13□□□□□ -1.27
COPS7B-220ENST00000479430 CFAP44Q96MT7 982 aa7.13□□□□□ -1.27
COPS7B-220ENST00000479430 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.13□□□□□ -1.27
COPS7B-220ENST00000479430 KIF21BO75037 1637 aa7.12□□□□□ -1.27
COPS7B-220ENST00000479430 ERICH3Q5RHP9 1530 aa7.12□□□□□ -1.27
COPS7B-220ENST00000479430 ABCC2Q92887 1545 aa7.12□□□□□ -1.27
COPS7B-220ENST00000479430 TPRNQ4KMQ1 711 aa7.12□□□□□ -1.27
COPS7B-220ENST00000479430 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
COPS7B-220ENST00000479430 CAPN15O75808 1086 aa7.11□□□□□ -1.27
COPS7B-220ENST00000479430 ASXL2Q76L83 1435 aa7.1□□□□□ -1.27
COPS7B-220ENST00000479430 PTPRGP23470 1445 aa7.08□□□□□ -1.28
COPS7B-220ENST00000479430 ZCCHC11Q5TAX3 1644 aaKnown RBP7.08□□□□□ -1.28
COPS7B-220ENST00000479430 MAP3K4Q9Y6R4 1608 aa7.08□□□□□ -1.28
COPS7B-220ENST00000479430 ARID3CA6NKF2 412 aa7.07□□□□□ -1.28
COPS7B-220ENST00000479430 RGL2O15211 777 aa7.07□□□□□ -1.28
COPS7B-220ENST00000479430 TSHZ2Q9NRE2 1034 aa7.07□□□□□ -1.28
COPS7B-220ENST00000479430 ABCB7O75027 752 aa7.06□□□□□ -1.28
COPS7B-220ENST00000479430 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
COPS7B-220ENST00000479430 FBXO41Q8TF61 875 aa7.06□□□□□ -1.28
COPS7B-220ENST00000479430 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
COPS7B-220ENST00000479430 EPRSP07814 1512 aaKnown RBP7.05□□□□□ -1.28
COPS7B-220ENST00000479430 KIAA0586Q9BVV6 1533 aa7.05□□□□□ -1.28
COPS7B-220ENST00000479430 GLI2P10070 1586 aa7.04□□□□□ -1.28
COPS7B-220ENST00000479430 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms