RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
U2AF1-210ENST00000478282 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
U2AF1-210ENST00000478282 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
U2AF1-210ENST00000478282 ZNF608Q9ULD9 1512 aaPredicted RBP21.91■■□□□ 1.1
U2AF1-210ENST00000478282 IGF1RP08069 1367 aa21.9■■□□□ 1.1
U2AF1-210ENST00000478282 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
U2AF1-210ENST00000478282 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
U2AF1-210ENST00000478282 CUL7Q14999 1698 aa21.87■■□□□ 1.09
U2AF1-210ENST00000478282 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
U2AF1-210ENST00000478282 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
U2AF1-210ENST00000478282 APLP2Q06481 763 aa21.83■■□□□ 1.08
U2AF1-210ENST00000478282 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
U2AF1-210ENST00000478282 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
U2AF1-210ENST00000478282 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
U2AF1-210ENST00000478282 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
U2AF1-210ENST00000478282 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-210ENST00000478282 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
U2AF1-210ENST00000478282 DHX57Q6P158 1386 aaKnown RBP21.72■■□□□ 1.07
U2AF1-210ENST00000478282 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
U2AF1-210ENST00000478282 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
U2AF1-210ENST00000478282 SUPT16HQ9Y5B9 1047 aaKnown RBP21.65■■□□□ 1.06
U2AF1-210ENST00000478282 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
U2AF1-210ENST00000478282 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
U2AF1-210ENST00000478282 CTTNBP2Q8WZ74 1663 aa21.58■■□□□ 1.04
U2AF1-210ENST00000478282 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
U2AF1-210ENST00000478282 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
U2AF1-210ENST00000478282 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
U2AF1-210ENST00000478282 CHD1O14646 1710 aa21.51■■□□□ 1.03
U2AF1-210ENST00000478282 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-210ENST00000478282 NUP160Q12769 1436 aa21.48■■□□□ 1.03
U2AF1-210ENST00000478282 CEP170Q5SW79 1584 aa21.47■■□□□ 1.03
U2AF1-210ENST00000478282 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
U2AF1-210ENST00000478282 KIAA0586Q9BVV6 1533 aa21.4■■□□□ 1.02
U2AF1-210ENST00000478282 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.01
U2AF1-210ENST00000478282 IQGAP2Q13576 1575 aa21.38■■□□□ 1.01
U2AF1-210ENST00000478282 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
U2AF1-210ENST00000478282 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
U2AF1-210ENST00000478282 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
U2AF1-210ENST00000478282 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
U2AF1-210ENST00000478282 SHROOM2Q13796 1616 aa21.33■■□□□ 1.01
U2AF1-210ENST00000478282 EFCAB5A4FU69 1503 aa21.33■■□□□ 1.01
U2AF1-210ENST00000478282 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
U2AF1-210ENST00000478282 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
U2AF1-210ENST00000478282 MAPKBP1O60336 1514 aa21.3■■□□□ 1
U2AF1-210ENST00000478282 KCNH8Q96L42 1107 aa21.27■■□□□ 1
U2AF1-210ENST00000478282 RAB3GAP2Q9H2M9 1393 aa21.27■■□□□ 1
U2AF1-210ENST00000478282 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
U2AF1-210ENST00000478282 ITGAEP38570 1179 aa21.22■□□□□ 0.99
U2AF1-210ENST00000478282 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
U2AF1-210ENST00000478282 FBLN2P98095 1184 aa21.2■□□□□ 0.98
U2AF1-210ENST00000478282 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
U2AF1-210ENST00000478282 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
U2AF1-210ENST00000478282 SETD5Q9C0A6 1442 aa21.16■□□□□ 0.98
U2AF1-210ENST00000478282 BCANQ96GW7 911 aa21.14■□□□□ 0.98
U2AF1-210ENST00000478282 FKBP8Q14318 412 aa21.14■□□□□ 0.97
U2AF1-210ENST00000478282 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
U2AF1-210ENST00000478282 JPH4Q96JJ6 628 aa21.11■□□□□ 0.97
U2AF1-210ENST00000478282 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.96
U2AF1-210ENST00000478282 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
U2AF1-210ENST00000478282 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
U2AF1-210ENST00000478282 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
U2AF1-210ENST00000478282 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
U2AF1-210ENST00000478282 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 CARMIL2Q6F5E8 1435 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 PHLDB1Q86UU1 1377 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
U2AF1-210ENST00000478282 NEFLP07196 543 aa21.03■□□□□ 0.96
U2AF1-210ENST00000478282 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
U2AF1-210ENST00000478282 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.95
U2AF1-210ENST00000478282 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.95
U2AF1-210ENST00000478282 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
U2AF1-210ENST00000478282 FYCO1Q9BQS8 1478 aa21■□□□□ 0.95
U2AF1-210ENST00000478282 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
U2AF1-210ENST00000478282 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
U2AF1-210ENST00000478282 ABCA8O94911 1581 aa20.97■□□□□ 0.95
U2AF1-210ENST00000478282 FAM50AQ14320 339 aaKnown RBP20.96■□□□□ 0.95
U2AF1-210ENST00000478282 ANP32CO43423 234 aa20.95■□□□□ 0.94
U2AF1-210ENST00000478282 RAPGEF6Q8TEU7 1601 aa20.94■□□□□ 0.94
U2AF1-210ENST00000478282 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
U2AF1-210ENST00000478282 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
U2AF1-210ENST00000478282 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
U2AF1-210ENST00000478282 HECW1Q76N89 1606 aa20.91■□□□□ 0.94
U2AF1-210ENST00000478282 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.93
U2AF1-210ENST00000478282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
U2AF1-210ENST00000478282 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
U2AF1-210ENST00000478282 PTPRGP23470 1445 aa20.85■□□□□ 0.93
U2AF1-210ENST00000478282 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
U2AF1-210ENST00000478282 PLB1Q6P1J6 1458 aa20.85■□□□□ 0.93
U2AF1-210ENST00000478282 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.92
U2AF1-210ENST00000478282 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
U2AF1-210ENST00000478282 EPRSP07814 1512 aaKnown RBP20.82■□□□□ 0.92
U2AF1-210ENST00000478282 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
U2AF1-210ENST00000478282 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
U2AF1-210ENST00000478282 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
U2AF1-210ENST00000478282 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
U2AF1-210ENST00000478282 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
U2AF1-210ENST00000478282 UACAQ9BZF9 1416 aa20.8■□□□□ 0.92
U2AF1-210ENST00000478282 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms