RNA–Protein interactions for RNA: ENST00000478250.1

NR4A1-205, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 1,820 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-205ENST00000478250 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
NR4A1-205ENST00000478250 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
NR4A1-205ENST00000478250 CUL7Q14999 1698 aa22.04■■□□□ 1.12
NR4A1-205ENST00000478250 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
NR4A1-205ENST00000478250 ARHGAP35Q9NRY4 1499 aa22.02■■□□□ 1.12
NR4A1-205ENST00000478250 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
NR4A1-205ENST00000478250 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
NR4A1-205ENST00000478250 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
NR4A1-205ENST00000478250 APLP2Q06481 763 aa21.95■■□□□ 1.1
NR4A1-205ENST00000478250 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
NR4A1-205ENST00000478250 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
NR4A1-205ENST00000478250 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
NR4A1-205ENST00000478250 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
NR4A1-205ENST00000478250 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
NR4A1-205ENST00000478250 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
NR4A1-205ENST00000478250 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.08
NR4A1-205ENST00000478250 MAP3K1Q13233 1512 aa21.83■■□□□ 1.08
NR4A1-205ENST00000478250 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
NR4A1-205ENST00000478250 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
NR4A1-205ENST00000478250 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
NR4A1-205ENST00000478250 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
NR4A1-205ENST00000478250 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
NR4A1-205ENST00000478250 FBLN2P98095 1184 aa21.76■■□□□ 1.07
NR4A1-205ENST00000478250 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
NR4A1-205ENST00000478250 CFAP43Q8NDM7 1665 aa21.73■■□□□ 1.07
NR4A1-205ENST00000478250 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
NR4A1-205ENST00000478250 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
NR4A1-205ENST00000478250 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
NR4A1-205ENST00000478250 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
NR4A1-205ENST00000478250 SAMD9Q5K651 1589 aa21.68■■□□□ 1.06
NR4A1-205ENST00000478250 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
NR4A1-205ENST00000478250 CHD1O14646 1710 aa21.67■■□□□ 1.06
NR4A1-205ENST00000478250 FYCO1Q9BQS8 1478 aa21.66■■□□□ 1.06
NR4A1-205ENST00000478250 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.05
NR4A1-205ENST00000478250 LRRC9Q6ZRR7 1453 aa21.63■■□□□ 1.05
NR4A1-205ENST00000478250 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
NR4A1-205ENST00000478250 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
NR4A1-205ENST00000478250 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
NR4A1-205ENST00000478250 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
NR4A1-205ENST00000478250 FMN1Q68DA7 1419 aa21.58■■□□□ 1.05
NR4A1-205ENST00000478250 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
NR4A1-205ENST00000478250 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
NR4A1-205ENST00000478250 NUP160Q12769 1436 aa21.56■■□□□ 1.04
NR4A1-205ENST00000478250 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
NR4A1-205ENST00000478250 P3H3Q8IVL6 736 aa21.52■■□□□ 1.04
NR4A1-205ENST00000478250 IQGAP2Q13576 1575 aa21.5■■□□□ 1.03
NR4A1-205ENST00000478250 KIAA0586Q9BVV6 1533 aa21.49■■□□□ 1.03
NR4A1-205ENST00000478250 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
NR4A1-205ENST00000478250 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
NR4A1-205ENST00000478250 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
NR4A1-205ENST00000478250 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
NR4A1-205ENST00000478250 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
NR4A1-205ENST00000478250 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
NR4A1-205ENST00000478250 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
NR4A1-205ENST00000478250 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
NR4A1-205ENST00000478250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.35■■□□□ 1.01
NR4A1-205ENST00000478250 MIER1Q8N108 512 aa21.34■■□□□ 1.01
NR4A1-205ENST00000478250 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
NR4A1-205ENST00000478250 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
NR4A1-205ENST00000478250 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
NR4A1-205ENST00000478250 SHROOM2Q13796 1616 aa21.32■■□□□ 1
NR4A1-205ENST00000478250 KIAA0556O60303 1618 aa21.3■■□□□ 1
NR4A1-205ENST00000478250 SUPT6HQ7KZ85 1726 aaKnown RBP21.3■■□□□ 1
NR4A1-205ENST00000478250 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
NR4A1-205ENST00000478250 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
NR4A1-205ENST00000478250 FGD6Q6ZV73 1430 aa21.27■□□□□ 0.99
NR4A1-205ENST00000478250 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
NR4A1-205ENST00000478250 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
NR4A1-205ENST00000478250 DISP1Q96F81 1524 aa21.25■□□□□ 0.99
NR4A1-205ENST00000478250 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
NR4A1-205ENST00000478250 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
NR4A1-205ENST00000478250 MAGI3Q5TCQ9 1506 aa21.23■□□□□ 0.99
NR4A1-205ENST00000478250 EPRSP07814 1512 aaKnown RBP21.23■□□□□ 0.99
NR4A1-205ENST00000478250 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
NR4A1-205ENST00000478250 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.98
NR4A1-205ENST00000478250 ITGAEP38570 1179 aa21.2■□□□□ 0.98
NR4A1-205ENST00000478250 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
NR4A1-205ENST00000478250 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
NR4A1-205ENST00000478250 MAPKBP1O60336 1514 aa21.14■□□□□ 0.98
NR4A1-205ENST00000478250 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.98
NR4A1-205ENST00000478250 RAPGEF6Q8TEU7 1601 aa21.14■□□□□ 0.98
NR4A1-205ENST00000478250 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
NR4A1-205ENST00000478250 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
NR4A1-205ENST00000478250 PTPRGP23470 1445 aa21.11■□□□□ 0.97
NR4A1-205ENST00000478250 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
NR4A1-205ENST00000478250 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
NR4A1-205ENST00000478250 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
NR4A1-205ENST00000478250 NUP153P49790 1475 aaKnown RBP21.09■□□□□ 0.97
NR4A1-205ENST00000478250 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
NR4A1-205ENST00000478250 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
NR4A1-205ENST00000478250 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
NR4A1-205ENST00000478250 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
NR4A1-205ENST00000478250 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
NR4A1-205ENST00000478250 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
NR4A1-205ENST00000478250 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
NR4A1-205ENST00000478250 PLB1Q6P1J6 1458 aa20.97■□□□□ 0.95
NR4A1-205ENST00000478250 NAIPQ13075 1403 aa20.97■□□□□ 0.95
NR4A1-205ENST00000478250 UACAQ9BZF9 1416 aa20.97■□□□□ 0.95
NR4A1-205ENST00000478250 ADCY10Q96PN6 1610 aa20.96■□□□□ 0.95
NR4A1-205ENST00000478250 ABCA8O94911 1581 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms