RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
RTFDC1-207ENST00000477573 IGF1RP08069 1367 aa18.38■□□□□ 0.53
RTFDC1-207ENST00000477573 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
RTFDC1-207ENST00000477573 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
RTFDC1-207ENST00000477573 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
RTFDC1-207ENST00000477573 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
RTFDC1-207ENST00000477573 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
RTFDC1-207ENST00000477573 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
RTFDC1-207ENST00000477573 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
RTFDC1-207ENST00000477573 CUL7Q14999 1698 aa18.24■□□□□ 0.51
RTFDC1-207ENST00000477573 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
RTFDC1-207ENST00000477573 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
RTFDC1-207ENST00000477573 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
RTFDC1-207ENST00000477573 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
RTFDC1-207ENST00000477573 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
RTFDC1-207ENST00000477573 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
RTFDC1-207ENST00000477573 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
RTFDC1-207ENST00000477573 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
RTFDC1-207ENST00000477573 PKNOX2Q96KN3 472 aa18.15■□□□□ 0.5
RTFDC1-207ENST00000477573 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
RTFDC1-207ENST00000477573 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
RTFDC1-207ENST00000477573 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
RTFDC1-207ENST00000477573 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
RTFDC1-207ENST00000477573 WDR62O43379 1518 aa18.12■□□□□ 0.49
RTFDC1-207ENST00000477573 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
RTFDC1-207ENST00000477573 MIER1Q8N108 512 aa18.11■□□□□ 0.49
RTFDC1-207ENST00000477573 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
RTFDC1-207ENST00000477573 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
RTFDC1-207ENST00000477573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
RTFDC1-207ENST00000477573 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
RTFDC1-207ENST00000477573 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
RTFDC1-207ENST00000477573 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
RTFDC1-207ENST00000477573 MSH5O43196 834 aa18.01■□□□□ 0.47
RTFDC1-207ENST00000477573 GRIN2BQ13224 1484 aa18■□□□□ 0.47
RTFDC1-207ENST00000477573 PODXL2Q9NZ53 605 aa18■□□□□ 0.47
RTFDC1-207ENST00000477573 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
RTFDC1-207ENST00000477573 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
RTFDC1-207ENST00000477573 AQRO60306 1485 aaKnown RBP eCLIP17.99■□□□□ 0.477e-9■■□□□ 12.6
RTFDC1-207ENST00000477573 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
RTFDC1-207ENST00000477573 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
RTFDC1-207ENST00000477573 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
RTFDC1-207ENST00000477573 MAP3K1Q13233 1512 aa17.94■□□□□ 0.46
RTFDC1-207ENST00000477573 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
RTFDC1-207ENST00000477573 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.45
RTFDC1-207ENST00000477573 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
RTFDC1-207ENST00000477573 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
RTFDC1-207ENST00000477573 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
RTFDC1-207ENST00000477573 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
RTFDC1-207ENST00000477573 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
RTFDC1-207ENST00000477573 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
RTFDC1-207ENST00000477573 FYCO1Q9BQS8 1478 aa17.86■□□□□ 0.45
RTFDC1-207ENST00000477573 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
RTFDC1-207ENST00000477573 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
RTFDC1-207ENST00000477573 IQGAP2Q13576 1575 aa17.83■□□□□ 0.44
RTFDC1-207ENST00000477573 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
RTFDC1-207ENST00000477573 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
RTFDC1-207ENST00000477573 CFAP43Q8NDM7 1665 aa17.81■□□□□ 0.44
RTFDC1-207ENST00000477573 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
RTFDC1-207ENST00000477573 ATP1B4Q9UN42 357 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-207ENST00000477573 RRBP1Q9P2E9 1410 aaKnown RBP17.78■□□□□ 0.44
RTFDC1-207ENST00000477573 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
RTFDC1-207ENST00000477573 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
RTFDC1-207ENST00000477573 KIAA0586Q9BVV6 1533 aa17.75■□□□□ 0.43
RTFDC1-207ENST00000477573 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-207ENST00000477573 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
RTFDC1-207ENST00000477573 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
RTFDC1-207ENST00000477573 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
RTFDC1-207ENST00000477573 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
RTFDC1-207ENST00000477573 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
RTFDC1-207ENST00000477573 NEFLP07196 543 aa17.69■□□□□ 0.42
RTFDC1-207ENST00000477573 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
RTFDC1-207ENST00000477573 FBLN2P98095 1184 aa17.64■□□□□ 0.42
RTFDC1-207ENST00000477573 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.42
RTFDC1-207ENST00000477573 HECW1Q76N89 1606 aa17.64■□□□□ 0.42
RTFDC1-207ENST00000477573 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
RTFDC1-207ENST00000477573 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
RTFDC1-207ENST00000477573 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
RTFDC1-207ENST00000477573 FKBP8Q14318 412 aa17.62■□□□□ 0.41
RTFDC1-207ENST00000477573 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
RTFDC1-207ENST00000477573 NUP160Q12769 1436 aa17.61■□□□□ 0.41
RTFDC1-207ENST00000477573 DISP1Q96F81 1524 aa17.6■□□□□ 0.41
RTFDC1-207ENST00000477573 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
RTFDC1-207ENST00000477573 BCANQ96GW7 911 aa17.6■□□□□ 0.41
RTFDC1-207ENST00000477573 EHBP1L1Q8N3D4 1523 aa17.59■□□□□ 0.41
RTFDC1-207ENST00000477573 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
RTFDC1-207ENST00000477573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
RTFDC1-207ENST00000477573 SUPT6HQ7KZ85 1726 aaKnown RBP17.56■□□□□ 0.4
RTFDC1-207ENST00000477573 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
RTFDC1-207ENST00000477573 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
RTFDC1-207ENST00000477573 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
RTFDC1-207ENST00000477573 JPH4Q96JJ6 628 aa17.53■□□□□ 0.4
RTFDC1-207ENST00000477573 ITGAEP38570 1179 aa17.53■□□□□ 0.4
RTFDC1-207ENST00000477573 NCOA2Q15596 1464 aa17.52■□□□□ 0.39
RTFDC1-207ENST00000477573 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
RTFDC1-207ENST00000477573 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
RTFDC1-207ENST00000477573 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
RTFDC1-207ENST00000477573 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
RTFDC1-207ENST00000477573 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
RTFDC1-207ENST00000477573 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
RTFDC1-207ENST00000477573 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 301.1 ms