RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
TPRN-203ENST00000477345 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
TPRN-203ENST00000477345 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
TPRN-203ENST00000477345 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.5
TPRN-203ENST00000477345 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
TPRN-203ENST00000477345 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
TPRN-203ENST00000477345 NBR1Q14596 966 aa18.13■□□□□ 0.49
TPRN-203ENST00000477345 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
TPRN-203ENST00000477345 CUX2O14529 1486 aa18.08■□□□□ 0.49
TPRN-203ENST00000477345 ANP32CO43423 234 aa18.08■□□□□ 0.48
TPRN-203ENST00000477345 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
TPRN-203ENST00000477345 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
TPRN-203ENST00000477345 CUX1P39880 1505 aa18.06■□□□□ 0.48
TPRN-203ENST00000477345 NESP48681 1621 aa18.05■□□□□ 0.48
TPRN-203ENST00000477345 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
TPRN-203ENST00000477345 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
TPRN-203ENST00000477345 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
TPRN-203ENST00000477345 VPS8Q8N3P4 1428 aa18.02■□□□□ 0.48
TPRN-203ENST00000477345 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
TPRN-203ENST00000477345 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
TPRN-203ENST00000477345 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
TPRN-203ENST00000477345 CFTRP13569 1480 aa17.98■□□□□ 0.47
TPRN-203ENST00000477345 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
TPRN-203ENST00000477345 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
TPRN-203ENST00000477345 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
TPRN-203ENST00000477345 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
TPRN-203ENST00000477345 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
TPRN-203ENST00000477345 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
TPRN-203ENST00000477345 KIF21BO75037 1637 aa17.94■□□□□ 0.46
TPRN-203ENST00000477345 IGF1RP08069 1367 aa17.94■□□□□ 0.46
TPRN-203ENST00000477345 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
TPRN-203ENST00000477345 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
TPRN-203ENST00000477345 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
TPRN-203ENST00000477345 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
TPRN-203ENST00000477345 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
TPRN-203ENST00000477345 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
TPRN-203ENST00000477345 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
TPRN-203ENST00000477345 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
TPRN-203ENST00000477345 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
TPRN-203ENST00000477345 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
TPRN-203ENST00000477345 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
TPRN-203ENST00000477345 FBLN2P98095 1184 aa17.83■□□□□ 0.45
TPRN-203ENST00000477345 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
TPRN-203ENST00000477345 FHOD3Q2V2M9 1422 aa17.78■□□□□ 0.44
TPRN-203ENST00000477345 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
TPRN-203ENST00000477345 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.44
TPRN-203ENST00000477345 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
TPRN-203ENST00000477345 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
TPRN-203ENST00000477345 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
TPRN-203ENST00000477345 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
TPRN-203ENST00000477345 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
TPRN-203ENST00000477345 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
TPRN-203ENST00000477345 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
TPRN-203ENST00000477345 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
TPRN-203ENST00000477345 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
TPRN-203ENST00000477345 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.41
TPRN-203ENST00000477345 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
TPRN-203ENST00000477345 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
TPRN-203ENST00000477345 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
TPRN-203ENST00000477345 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
TPRN-203ENST00000477345 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
TPRN-203ENST00000477345 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
TPRN-203ENST00000477345 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
TPRN-203ENST00000477345 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
TPRN-203ENST00000477345 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
TPRN-203ENST00000477345 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
TPRN-203ENST00000477345 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
TPRN-203ENST00000477345 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
TPRN-203ENST00000477345 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
TPRN-203ENST00000477345 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
TPRN-203ENST00000477345 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
TPRN-203ENST00000477345 FOXD1Q16676 465 aa17.54■□□□□ 0.4
TPRN-203ENST00000477345 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
TPRN-203ENST00000477345 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
TPRN-203ENST00000477345 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.39
TPRN-203ENST00000477345 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
TPRN-203ENST00000477345 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
TPRN-203ENST00000477345 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
TPRN-203ENST00000477345 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
TPRN-203ENST00000477345 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
TPRN-203ENST00000477345 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
TPRN-203ENST00000477345 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
TPRN-203ENST00000477345 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
TPRN-203ENST00000477345 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
TPRN-203ENST00000477345 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
TPRN-203ENST00000477345 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
TPRN-203ENST00000477345 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
TPRN-203ENST00000477345 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
TPRN-203ENST00000477345 NEFMP07197 916 aa17.39■□□□□ 0.37
TPRN-203ENST00000477345 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
TPRN-203ENST00000477345 EIF4G2P78344 907 aaKnown RBP eCLIP17.38■□□□□ 0.37
TPRN-203ENST00000477345 ARXQ96QS3 562 aa17.38■□□□□ 0.37
TPRN-203ENST00000477345 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
TPRN-203ENST00000477345 PCF11O94913 1555 aaKnown RBP17.37■□□□□ 0.37
TPRN-203ENST00000477345 BRPF3Q9ULD4 1205 aa17.37■□□□□ 0.37
TPRN-203ENST00000477345 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
TPRN-203ENST00000477345 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
TPRN-203ENST00000477345 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
TPRN-203ENST00000477345 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
TPRN-203ENST00000477345 SKAP1Q86WV1 359 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms