RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
TPRN-203ENST00000477345 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
TPRN-203ENST00000477345 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
TPRN-203ENST00000477345 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.12
TPRN-203ENST00000477345 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
TPRN-203ENST00000477345 MYT1Q01538 1121 aa21.58■■□□□ 1.05
TPRN-203ENST00000477345 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
TPRN-203ENST00000477345 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
TPRN-203ENST00000477345 HRCP23327 699 aa21.44■■□□□ 1.02
TPRN-203ENST00000477345 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
TPRN-203ENST00000477345 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
TPRN-203ENST00000477345 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
TPRN-203ENST00000477345 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
TPRN-203ENST00000477345 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.92
TPRN-203ENST00000477345 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
TPRN-203ENST00000477345 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
TPRN-203ENST00000477345 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
TPRN-203ENST00000477345 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
TPRN-203ENST00000477345 ABCC9O60706 1549 aa20.44■□□□□ 0.86
TPRN-203ENST00000477345 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
TPRN-203ENST00000477345 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
TPRN-203ENST00000477345 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
TPRN-203ENST00000477345 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
TPRN-203ENST00000477345 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
TPRN-203ENST00000477345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
TPRN-203ENST00000477345 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
TPRN-203ENST00000477345 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
TPRN-203ENST00000477345 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
TPRN-203ENST00000477345 GTF3C3Q9Y5Q9 886 aa19.95■□□□□ 0.78
TPRN-203ENST00000477345 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
TPRN-203ENST00000477345 PRKCSHP14314 528 aaPredicted RBP19.91■□□□□ 0.78
TPRN-203ENST00000477345 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
TPRN-203ENST00000477345 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
TPRN-203ENST00000477345 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
TPRN-203ENST00000477345 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
TPRN-203ENST00000477345 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
TPRN-203ENST00000477345 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
TPRN-203ENST00000477345 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
TPRN-203ENST00000477345 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
TPRN-203ENST00000477345 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
TPRN-203ENST00000477345 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
TPRN-203ENST00000477345 NACADO15069 1562 aa19.42■□□□□ 0.7
TPRN-203ENST00000477345 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
TPRN-203ENST00000477345 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
TPRN-203ENST00000477345 WIZO95785 1651 aa19.3■□□□□ 0.68
TPRN-203ENST00000477345 APLP2Q06481 763 aa19.23■□□□□ 0.67
TPRN-203ENST00000477345 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
TPRN-203ENST00000477345 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
TPRN-203ENST00000477345 MIER1Q8N108 512 aa19.2■□□□□ 0.66
TPRN-203ENST00000477345 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
TPRN-203ENST00000477345 BCANQ96GW7 911 aa19.1■□□□□ 0.65
TPRN-203ENST00000477345 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
TPRN-203ENST00000477345 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
TPRN-203ENST00000477345 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
TPRN-203ENST00000477345 SOGA1O94964 1423 aa18.89■□□□□ 0.61
TPRN-203ENST00000477345 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
TPRN-203ENST00000477345 ITGAEP38570 1179 aa18.86■□□□□ 0.61
TPRN-203ENST00000477345 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
TPRN-203ENST00000477345 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
TPRN-203ENST00000477345 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
TPRN-203ENST00000477345 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
TPRN-203ENST00000477345 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
TPRN-203ENST00000477345 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
TPRN-203ENST00000477345 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
TPRN-203ENST00000477345 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
TPRN-203ENST00000477345 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
TPRN-203ENST00000477345 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
TPRN-203ENST00000477345 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
TPRN-203ENST00000477345 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
TPRN-203ENST00000477345 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
TPRN-203ENST00000477345 FKBP8Q14318 412 aa18.59■□□□□ 0.57
TPRN-203ENST00000477345 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
TPRN-203ENST00000477345 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
TPRN-203ENST00000477345 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
TPRN-203ENST00000477345 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
TPRN-203ENST00000477345 NEFLP07196 543 aa18.5■□□□□ 0.55
TPRN-203ENST00000477345 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
TPRN-203ENST00000477345 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
TPRN-203ENST00000477345 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
TPRN-203ENST00000477345 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
TPRN-203ENST00000477345 CNGB1Q14028 1251 aaPredicted RBP18.42■□□□□ 0.54
TPRN-203ENST00000477345 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
TPRN-203ENST00000477345 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
TPRN-203ENST00000477345 UBE2Q2Q8WVN8 375 aa18.38■□□□□ 0.53
TPRN-203ENST00000477345 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
TPRN-203ENST00000477345 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
TPRN-203ENST00000477345 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
TPRN-203ENST00000477345 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
TPRN-203ENST00000477345 CLIP1P30622 1438 aa18.33■□□□□ 0.52
TPRN-203ENST00000477345 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
TPRN-203ENST00000477345 RAPGEF2Q9Y4G8 1499 aa18.33■□□□□ 0.52
TPRN-203ENST00000477345 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
TPRN-203ENST00000477345 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
TPRN-203ENST00000477345 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
TPRN-203ENST00000477345 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
TPRN-203ENST00000477345 MSH5O43196 834 aa18.24■□□□□ 0.51
TPRN-203ENST00000477345 EEA1Q15075 1411 aa18.22■□□□□ 0.51
TPRN-203ENST00000477345 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
TPRN-203ENST00000477345 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
TPRN-203ENST00000477345 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms