RNA–Protein interactions for RNA: ENST00000476701.5

SDK1-206, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene SDK1, Length 3,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-206ENST00000476701 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
SDK1-206ENST00000476701 FKBP8Q14318 412 aa17.19■□□□□ 0.34
SDK1-206ENST00000476701 CFTRP13569 1480 aa17.19■□□□□ 0.34
SDK1-206ENST00000476701 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
SDK1-206ENST00000476701 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
SDK1-206ENST00000476701 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
SDK1-206ENST00000476701 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
SDK1-206ENST00000476701 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
SDK1-206ENST00000476701 CUX2O14529 1486 aa17.13■□□□□ 0.33
SDK1-206ENST00000476701 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
SDK1-206ENST00000476701 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
SDK1-206ENST00000476701 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
SDK1-206ENST00000476701 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
SDK1-206ENST00000476701 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
SDK1-206ENST00000476701 IGF1RP08069 1367 aa17.08■□□□□ 0.33
SDK1-206ENST00000476701 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
SDK1-206ENST00000476701 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
SDK1-206ENST00000476701 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
SDK1-206ENST00000476701 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
SDK1-206ENST00000476701 WDR97A6NE52 1622 aa17.02■□□□□ 0.32
SDK1-206ENST00000476701 NESP48681 1621 aa17.02■□□□□ 0.31
SDK1-206ENST00000476701 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
SDK1-206ENST00000476701 NEFLP07196 543 aa17■□□□□ 0.31
SDK1-206ENST00000476701 ANP32CO43423 234 aa16.99■□□□□ 0.31
SDK1-206ENST00000476701 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SDK1-206ENST00000476701 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
SDK1-206ENST00000476701 FHOD3Q2V2M9 1422 aa16.97■□□□□ 0.31
SDK1-206ENST00000476701 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
SDK1-206ENST00000476701 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
SDK1-206ENST00000476701 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
SDK1-206ENST00000476701 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
SDK1-206ENST00000476701 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
SDK1-206ENST00000476701 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
SDK1-206ENST00000476701 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
SDK1-206ENST00000476701 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
SDK1-206ENST00000476701 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
SDK1-206ENST00000476701 HNRNPUQ00839 825 aaKnown RBP eCLIP16.88■□□□□ 0.29
SDK1-206ENST00000476701 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
SDK1-206ENST00000476701 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
SDK1-206ENST00000476701 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
SDK1-206ENST00000476701 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
SDK1-206ENST00000476701 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
SDK1-206ENST00000476701 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
SDK1-206ENST00000476701 FOXD1Q16676 465 aa16.82■□□□□ 0.28
SDK1-206ENST00000476701 PCF11O94913 1555 aaKnown RBP16.8■□□□□ 0.28
SDK1-206ENST00000476701 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
SDK1-206ENST00000476701 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
SDK1-206ENST00000476701 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
SDK1-206ENST00000476701 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
SDK1-206ENST00000476701 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
SDK1-206ENST00000476701 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
SDK1-206ENST00000476701 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
SDK1-206ENST00000476701 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
SDK1-206ENST00000476701 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
SDK1-206ENST00000476701 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
SDK1-206ENST00000476701 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
SDK1-206ENST00000476701 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
SDK1-206ENST00000476701 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
SDK1-206ENST00000476701 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.27
SDK1-206ENST00000476701 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
SDK1-206ENST00000476701 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
SDK1-206ENST00000476701 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
SDK1-206ENST00000476701 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
SDK1-206ENST00000476701 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
SDK1-206ENST00000476701 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
SDK1-206ENST00000476701 MSH5O43196 834 aa16.66■□□□□ 0.26
SDK1-206ENST00000476701 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
SDK1-206ENST00000476701 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
SDK1-206ENST00000476701 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
SDK1-206ENST00000476701 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
SDK1-206ENST00000476701 ZNF326Q5BKZ1 582 aaKnown RBP16.63■□□□□ 0.25
SDK1-206ENST00000476701 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
SDK1-206ENST00000476701 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SDK1-206ENST00000476701 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
SDK1-206ENST00000476701 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
SDK1-206ENST00000476701 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
SDK1-206ENST00000476701 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
SDK1-206ENST00000476701 NAIPQ13075 1403 aa16.61■□□□□ 0.25
SDK1-206ENST00000476701 UACAQ9BZF9 1416 aa16.61■□□□□ 0.25
SDK1-206ENST00000476701 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
SDK1-206ENST00000476701 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
SDK1-206ENST00000476701 HFM1A2PYH4 1435 aa16.58■□□□□ 0.25
SDK1-206ENST00000476701 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
SDK1-206ENST00000476701 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
SDK1-206ENST00000476701 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
SDK1-206ENST00000476701 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
SDK1-206ENST00000476701 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
SDK1-206ENST00000476701 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
SDK1-206ENST00000476701 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
SDK1-206ENST00000476701 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
SDK1-206ENST00000476701 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
SDK1-206ENST00000476701 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.24
SDK1-206ENST00000476701 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
SDK1-206ENST00000476701 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
SDK1-206ENST00000476701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
SDK1-206ENST00000476701 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
SDK1-206ENST00000476701 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
SDK1-206ENST00000476701 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
SDK1-206ENST00000476701 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
SDK1-206ENST00000476701 CUL7Q14999 1698 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms