RNA–Protein interactions for RNA: ENST00000476701.5

SDK1-206, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene SDK1, Length 3,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-206ENST00000476701 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
SDK1-206ENST00000476701 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
SDK1-206ENST00000476701 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
SDK1-206ENST00000476701 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
SDK1-206ENST00000476701 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
SDK1-206ENST00000476701 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
SDK1-206ENST00000476701 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
SDK1-206ENST00000476701 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
SDK1-206ENST00000476701 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
SDK1-206ENST00000476701 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
SDK1-206ENST00000476701 HRCP23327 699 aa19.91■□□□□ 0.78
SDK1-206ENST00000476701 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
SDK1-206ENST00000476701 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.76
SDK1-206ENST00000476701 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
SDK1-206ENST00000476701 MYT1Q01538 1121 aa19.47■□□□□ 0.71
SDK1-206ENST00000476701 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
SDK1-206ENST00000476701 SLC24A1O60721 1099 aa19.33■□□□□ 0.69
SDK1-206ENST00000476701 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
SDK1-206ENST00000476701 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
SDK1-206ENST00000476701 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
SDK1-206ENST00000476701 ABCC9O60706 1549 aa19.14■□□□□ 0.65
SDK1-206ENST00000476701 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
SDK1-206ENST00000476701 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
SDK1-206ENST00000476701 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
SDK1-206ENST00000476701 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
SDK1-206ENST00000476701 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
SDK1-206ENST00000476701 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
SDK1-206ENST00000476701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
SDK1-206ENST00000476701 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
SDK1-206ENST00000476701 CCER1Q8TC90 406 aaPredicted RBP18.66■□□□□ 0.58
SDK1-206ENST00000476701 NACADO15069 1562 aa18.65■□□□□ 0.58
SDK1-206ENST00000476701 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
SDK1-206ENST00000476701 WIZO95785 1651 aa18.45■□□□□ 0.54
SDK1-206ENST00000476701 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
SDK1-206ENST00000476701 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
SDK1-206ENST00000476701 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
SDK1-206ENST00000476701 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
SDK1-206ENST00000476701 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
SDK1-206ENST00000476701 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
SDK1-206ENST00000476701 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
SDK1-206ENST00000476701 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
SDK1-206ENST00000476701 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
SDK1-206ENST00000476701 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.52
SDK1-206ENST00000476701 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
SDK1-206ENST00000476701 SOGA1O94964 1423 aa18.23■□□□□ 0.51
SDK1-206ENST00000476701 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
SDK1-206ENST00000476701 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
SDK1-206ENST00000476701 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
SDK1-206ENST00000476701 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
SDK1-206ENST00000476701 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
SDK1-206ENST00000476701 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
SDK1-206ENST00000476701 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
SDK1-206ENST00000476701 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
SDK1-206ENST00000476701 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
SDK1-206ENST00000476701 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
SDK1-206ENST00000476701 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
SDK1-206ENST00000476701 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
SDK1-206ENST00000476701 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
SDK1-206ENST00000476701 MIER1Q8N108 512 aa17.98■□□□□ 0.47
SDK1-206ENST00000476701 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
SDK1-206ENST00000476701 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
SDK1-206ENST00000476701 APLP2Q06481 763 aa17.93■□□□□ 0.46
SDK1-206ENST00000476701 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.461e-7■■■■■ 66.8
SDK1-206ENST00000476701 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
SDK1-206ENST00000476701 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
SDK1-206ENST00000476701 CLIP1P30622 1438 aa17.79■□□□□ 0.44
SDK1-206ENST00000476701 ITGAEP38570 1179 aa17.77■□□□□ 0.44
SDK1-206ENST00000476701 EEA1Q15075 1411 aa17.73■□□□□ 0.43
SDK1-206ENST00000476701 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
SDK1-206ENST00000476701 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
SDK1-206ENST00000476701 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
SDK1-206ENST00000476701 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
SDK1-206ENST00000476701 CEP164Q9UPV0 1460 aa17.66■□□□□ 0.42
SDK1-206ENST00000476701 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
SDK1-206ENST00000476701 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
SDK1-206ENST00000476701 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
SDK1-206ENST00000476701 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
SDK1-206ENST00000476701 KIF21BO75037 1637 aa17.49■□□□□ 0.39
SDK1-206ENST00000476701 KCNH8Q96L42 1107 aa17.49■□□□□ 0.39
SDK1-206ENST00000476701 ATP1B4Q9UN42 357 aaPredicted RBP17.49■□□□□ 0.39
SDK1-206ENST00000476701 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
SDK1-206ENST00000476701 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
SDK1-206ENST00000476701 BCANQ96GW7 911 aa17.43■□□□□ 0.38
SDK1-206ENST00000476701 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
SDK1-206ENST00000476701 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
SDK1-206ENST00000476701 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
SDK1-206ENST00000476701 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
SDK1-206ENST00000476701 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
SDK1-206ENST00000476701 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
SDK1-206ENST00000476701 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
SDK1-206ENST00000476701 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
SDK1-206ENST00000476701 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
SDK1-206ENST00000476701 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
SDK1-206ENST00000476701 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
SDK1-206ENST00000476701 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
SDK1-206ENST00000476701 CUX1P39880 1505 aa17.25■□□□□ 0.35
SDK1-206ENST00000476701 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
SDK1-206ENST00000476701 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
SDK1-206ENST00000476701 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
SDK1-206ENST00000476701 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms