RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
CDKAL1-203ENST00000476517 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
CDKAL1-203ENST00000476517 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
CDKAL1-203ENST00000476517 IGF1RP08069 1367 aa19.77■□□□□ 0.76
CDKAL1-203ENST00000476517 CTTNBP2Q8WZ74 1663 aa19.75■□□□□ 0.75
CDKAL1-203ENST00000476517 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
CDKAL1-203ENST00000476517 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
CDKAL1-203ENST00000476517 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
CDKAL1-203ENST00000476517 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
CDKAL1-203ENST00000476517 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
CDKAL1-203ENST00000476517 CLIP1P30622 1438 aa19.65■□□□□ 0.74
CDKAL1-203ENST00000476517 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
CDKAL1-203ENST00000476517 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDKAL1-203ENST00000476517 CHD1O14646 1710 aa19.57■□□□□ 0.72
CDKAL1-203ENST00000476517 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
CDKAL1-203ENST00000476517 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
CDKAL1-203ENST00000476517 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
CDKAL1-203ENST00000476517 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
CDKAL1-203ENST00000476517 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
CDKAL1-203ENST00000476517 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
CDKAL1-203ENST00000476517 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
CDKAL1-203ENST00000476517 SYNJ2O15056 1496 aa19.42■□□□□ 0.7
CDKAL1-203ENST00000476517 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
CDKAL1-203ENST00000476517 SAMD9Q5K651 1589 aa19.41■□□□□ 0.7
CDKAL1-203ENST00000476517 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
CDKAL1-203ENST00000476517 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
CDKAL1-203ENST00000476517 FBLN2P98095 1184 aa19.36■□□□□ 0.69
CDKAL1-203ENST00000476517 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.68
CDKAL1-203ENST00000476517 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
CDKAL1-203ENST00000476517 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
CDKAL1-203ENST00000476517 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
CDKAL1-203ENST00000476517 PCF11O94913 1555 aaKnown RBP19.29■□□□□ 0.68
CDKAL1-203ENST00000476517 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
CDKAL1-203ENST00000476517 CFAP43Q8NDM7 1665 aa19.29■□□□□ 0.68
CDKAL1-203ENST00000476517 APLP2Q06481 763 aa19.28■□□□□ 0.68
CDKAL1-203ENST00000476517 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
CDKAL1-203ENST00000476517 NUP160Q12769 1436 aa19.25■□□□□ 0.67
CDKAL1-203ENST00000476517 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CDKAL1-203ENST00000476517 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
CDKAL1-203ENST00000476517 FYCO1Q9BQS8 1478 aa19.24■□□□□ 0.67
CDKAL1-203ENST00000476517 KIAA0556O60303 1618 aa19.24■□□□□ 0.67
CDKAL1-203ENST00000476517 MAP3K1Q13233 1512 aa19.22■□□□□ 0.67
CDKAL1-203ENST00000476517 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
CDKAL1-203ENST00000476517 PCGF6Q9BYE7 350 aa19.19■□□□□ 0.66
CDKAL1-203ENST00000476517 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
CDKAL1-203ENST00000476517 HECW1Q76N89 1606 aa19.17■□□□□ 0.66
CDKAL1-203ENST00000476517 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
CDKAL1-203ENST00000476517 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
CDKAL1-203ENST00000476517 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
CDKAL1-203ENST00000476517 DISP1Q96F81 1524 aa19.12■□□□□ 0.65
CDKAL1-203ENST00000476517 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
CDKAL1-203ENST00000476517 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
CDKAL1-203ENST00000476517 CCDC18Q5T9S5 1454 aa19.08■□□□□ 0.64
CDKAL1-203ENST00000476517 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
CDKAL1-203ENST00000476517 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
CDKAL1-203ENST00000476517 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
CDKAL1-203ENST00000476517 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
CDKAL1-203ENST00000476517 KDM4FA0A1W2PPD8 638 aa19.02■□□□□ 0.64
CDKAL1-203ENST00000476517 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
CDKAL1-203ENST00000476517 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
CDKAL1-203ENST00000476517 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
CDKAL1-203ENST00000476517 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
CDKAL1-203ENST00000476517 ERCC6L2Q5T890 1561 aa18.97■□□□□ 0.63
CDKAL1-203ENST00000476517 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
CDKAL1-203ENST00000476517 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
CDKAL1-203ENST00000476517 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
CDKAL1-203ENST00000476517 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
CDKAL1-203ENST00000476517 ABCA8O94911 1581 aa18.92■□□□□ 0.62
CDKAL1-203ENST00000476517 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
CDKAL1-203ENST00000476517 RRBP1Q9P2E9 1410 aaKnown RBP18.9■□□□□ 0.62
CDKAL1-203ENST00000476517 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
CDKAL1-203ENST00000476517 CDK13Q14004 1512 aaKnown RBP18.89■□□□□ 0.61
CDKAL1-203ENST00000476517 PLB1Q6P1J6 1458 aa18.85■□□□□ 0.61
CDKAL1-203ENST00000476517 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
CDKAL1-203ENST00000476517 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
CDKAL1-203ENST00000476517 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.61
CDKAL1-203ENST00000476517 PTPRGP23470 1445 aa18.82■□□□□ 0.6
CDKAL1-203ENST00000476517 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
CDKAL1-203ENST00000476517 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
CDKAL1-203ENST00000476517 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
CDKAL1-203ENST00000476517 KDM6BO15054 1643 aa18.79■□□□□ 0.6
CDKAL1-203ENST00000476517 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
CDKAL1-203ENST00000476517 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
CDKAL1-203ENST00000476517 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
CDKAL1-203ENST00000476517 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
CDKAL1-203ENST00000476517 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
CDKAL1-203ENST00000476517 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
CDKAL1-203ENST00000476517 KIF14Q15058 1648 aa18.75■□□□□ 0.59
CDKAL1-203ENST00000476517 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
CDKAL1-203ENST00000476517 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CDKAL1-203ENST00000476517 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
CDKAL1-203ENST00000476517 TROQ12816 1431 aaPredicted RBP18.73■□□□□ 0.59
CDKAL1-203ENST00000476517 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
CDKAL1-203ENST00000476517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDKAL1-203ENST00000476517 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
CDKAL1-203ENST00000476517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
CDKAL1-203ENST00000476517 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
CDKAL1-203ENST00000476517 UHRF1BP1LA0JNW5 1464 aa18.7■□□□□ 0.58
CDKAL1-203ENST00000476517 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
CDKAL1-203ENST00000476517 ZCCHC11Q5TAX3 1644 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms