RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
COL11A1-209ENST00000475980 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
COL11A1-209ENST00000475980 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
COL11A1-209ENST00000475980 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-209ENST00000475980 FBLN2P98095 1184 aa13.66□□□□□ -0.22
COL11A1-209ENST00000475980 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
COL11A1-209ENST00000475980 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
COL11A1-209ENST00000475980 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
COL11A1-209ENST00000475980 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
COL11A1-209ENST00000475980 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-209ENST00000475980 WDR62O43379 1518 aa13.57□□□□□ -0.24
COL11A1-209ENST00000475980 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
COL11A1-209ENST00000475980 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
COL11A1-209ENST00000475980 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
COL11A1-209ENST00000475980 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
COL11A1-209ENST00000475980 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
COL11A1-209ENST00000475980 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
COL11A1-209ENST00000475980 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
COL11A1-209ENST00000475980 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
COL11A1-209ENST00000475980 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-209ENST00000475980 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
COL11A1-209ENST00000475980 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
COL11A1-209ENST00000475980 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-209ENST00000475980 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-209ENST00000475980 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
COL11A1-209ENST00000475980 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-209ENST00000475980 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-209ENST00000475980 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
COL11A1-209ENST00000475980 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
COL11A1-209ENST00000475980 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
COL11A1-209ENST00000475980 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
COL11A1-209ENST00000475980 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
COL11A1-209ENST00000475980 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
COL11A1-209ENST00000475980 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
COL11A1-209ENST00000475980 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
COL11A1-209ENST00000475980 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
COL11A1-209ENST00000475980 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
COL11A1-209ENST00000475980 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
COL11A1-209ENST00000475980 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
COL11A1-209ENST00000475980 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
COL11A1-209ENST00000475980 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
COL11A1-209ENST00000475980 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-209ENST00000475980 CFTRP13569 1480 aa13.12□□□□□ -0.31
COL11A1-209ENST00000475980 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
COL11A1-209ENST00000475980 C7P10643 843 aa13.1□□□□□ -0.31
COL11A1-209ENST00000475980 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
COL11A1-209ENST00000475980 CHD1O14646 1710 aa13.09□□□□□ -0.31
COL11A1-209ENST00000475980 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
COL11A1-209ENST00000475980 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
COL11A1-209ENST00000475980 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
COL11A1-209ENST00000475980 ZBTB22O15209 634 aa13.05□□□□□ -0.32
COL11A1-209ENST00000475980 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
COL11A1-209ENST00000475980 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
COL11A1-209ENST00000475980 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-209ENST00000475980 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
COL11A1-209ENST00000475980 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
COL11A1-209ENST00000475980 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-209ENST00000475980 WIZO95785 1651 aa12.97□□□□□ -0.33
COL11A1-209ENST00000475980 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
COL11A1-209ENST00000475980 ATMINO43313 823 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-209ENST00000475980 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
COL11A1-209ENST00000475980 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
COL11A1-209ENST00000475980 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
COL11A1-209ENST00000475980 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
COL11A1-209ENST00000475980 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
COL11A1-209ENST00000475980 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
COL11A1-209ENST00000475980 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL11A1-209ENST00000475980 DNMBPQ6XZF7 1577 aa12.84□□□□□ -0.35
COL11A1-209ENST00000475980 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
COL11A1-209ENST00000475980 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
COL11A1-209ENST00000475980 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
COL11A1-209ENST00000475980 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
COL11A1-209ENST00000475980 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
COL11A1-209ENST00000475980 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
COL11A1-209ENST00000475980 ST18O60284 1047 aa12.75□□□□□ -0.37
COL11A1-209ENST00000475980 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-209ENST00000475980 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
COL11A1-209ENST00000475980 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL11A1-209ENST00000475980 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-209ENST00000475980 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-209ENST00000475980 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
COL11A1-209ENST00000475980 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
COL11A1-209ENST00000475980 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
COL11A1-209ENST00000475980 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-209ENST00000475980 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
COL11A1-209ENST00000475980 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
COL11A1-209ENST00000475980 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
COL11A1-209ENST00000475980 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
COL11A1-209ENST00000475980 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
COL11A1-209ENST00000475980 SOGA1O94964 1423 aa12.61□□□□□ -0.39
COL11A1-209ENST00000475980 KDM6BO15054 1643 aa12.59□□□□□ -0.39
COL11A1-209ENST00000475980 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
COL11A1-209ENST00000475980 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-209ENST00000475980 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
COL11A1-209ENST00000475980 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
COL11A1-209ENST00000475980 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
COL11A1-209ENST00000475980 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
COL11A1-209ENST00000475980 SEC24BO95487 1268 aa12.55□□□□□ -0.4
COL11A1-209ENST00000475980 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
COL11A1-209ENST00000475980 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms