RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.3
DFFB-208ENST00000475969 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
DFFB-208ENST00000475969 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
DFFB-208ENST00000475969 FHOD3Q2V2M9 1422 aa23.1■■□□□ 1.29
DFFB-208ENST00000475969 SIN3AQ96ST3 1273 aa23.1■■□□□ 1.29
DFFB-208ENST00000475969 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
DFFB-208ENST00000475969 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
DFFB-208ENST00000475969 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
DFFB-208ENST00000475969 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
DFFB-208ENST00000475969 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
DFFB-208ENST00000475969 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
DFFB-208ENST00000475969 PCF11O94913 1555 aaKnown RBP23■■□□□ 1.27
DFFB-208ENST00000475969 SETD5Q9C0A6 1442 aa22.97■■□□□ 1.27
DFFB-208ENST00000475969 MAPKBP1O60336 1514 aa22.97■■□□□ 1.27
DFFB-208ENST00000475969 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
DFFB-208ENST00000475969 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
DFFB-208ENST00000475969 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.27
DFFB-208ENST00000475969 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
DFFB-208ENST00000475969 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.26
DFFB-208ENST00000475969 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
DFFB-208ENST00000475969 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
DFFB-208ENST00000475969 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
DFFB-208ENST00000475969 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
DFFB-208ENST00000475969 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
DFFB-208ENST00000475969 CFAP43Q8NDM7 1665 aa22.8■■□□□ 1.24
DFFB-208ENST00000475969 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
DFFB-208ENST00000475969 CASKIN1Q8WXD9 1431 aa22.78■■□□□ 1.24
DFFB-208ENST00000475969 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
DFFB-208ENST00000475969 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
DFFB-208ENST00000475969 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
DFFB-208ENST00000475969 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
DFFB-208ENST00000475969 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
DFFB-208ENST00000475969 FMN1Q68DA7 1419 aa22.69■■□□□ 1.22
DFFB-208ENST00000475969 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
DFFB-208ENST00000475969 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
DFFB-208ENST00000475969 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
DFFB-208ENST00000475969 CUL7Q14999 1698 aa22.68■■□□□ 1.22
DFFB-208ENST00000475969 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
DFFB-208ENST00000475969 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
DFFB-208ENST00000475969 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
DFFB-208ENST00000475969 BCANQ96GW7 911 aa22.64■■□□□ 1.22
DFFB-208ENST00000475969 TONSLQ96HA7 1378 aa22.62■■□□□ 1.21
DFFB-208ENST00000475969 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
DFFB-208ENST00000475969 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.218e-7■■■■■ 28.7
DFFB-208ENST00000475969 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
DFFB-208ENST00000475969 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
DFFB-208ENST00000475969 LRRIQ1Q96JM4 1722 aa22.59■■□□□ 1.21
DFFB-208ENST00000475969 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
DFFB-208ENST00000475969 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.2
DFFB-208ENST00000475969 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
DFFB-208ENST00000475969 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
DFFB-208ENST00000475969 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
DFFB-208ENST00000475969 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
DFFB-208ENST00000475969 NAIPQ13075 1403 aa22.51■■□□□ 1.19
DFFB-208ENST00000475969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.51■■□□□ 1.19
DFFB-208ENST00000475969 FOXD1Q16676 465 aa22.51■■□□□ 1.19
DFFB-208ENST00000475969 SAMD9Q5K651 1589 aa22.5■■□□□ 1.19
DFFB-208ENST00000475969 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
DFFB-208ENST00000475969 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
DFFB-208ENST00000475969 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
DFFB-208ENST00000475969 ANP32CO43423 234 aa22.49■■□□□ 1.19
DFFB-208ENST00000475969 PTPN23Q9H3S7 1636 aa22.48■■□□□ 1.19
DFFB-208ENST00000475969 UACAQ9BZF9 1416 aa22.48■■□□□ 1.19
DFFB-208ENST00000475969 FKBP8Q14318 412 aa22.46■■□□□ 1.19
DFFB-208ENST00000475969 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
DFFB-208ENST00000475969 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
DFFB-208ENST00000475969 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
DFFB-208ENST00000475969 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.17
DFFB-208ENST00000475969 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
DFFB-208ENST00000475969 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
DFFB-208ENST00000475969 KDM6BO15054 1643 aa22.35■■□□□ 1.17
DFFB-208ENST00000475969 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
DFFB-208ENST00000475969 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
DFFB-208ENST00000475969 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
DFFB-208ENST00000475969 HSPA5P11021 654 aaKnown RBP22.33■■□□□ 1.16
DFFB-208ENST00000475969 MPHOSPH9Q99550 1183 aa22.32■■□□□ 1.16
DFFB-208ENST00000475969 IQGAP2Q13576 1575 aa22.31■■□□□ 1.16
DFFB-208ENST00000475969 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
DFFB-208ENST00000475969 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
DFFB-208ENST00000475969 FBLN2P98095 1184 aa22.29■■□□□ 1.16
DFFB-208ENST00000475969 DENND4BO75064 1496 aaPredicted RBP22.29■■□□□ 1.16
DFFB-208ENST00000475969 CCER2I3L3R5 266 aa22.29■■□□□ 1.16
DFFB-208ENST00000475969 L3MBTL2Q969R5 705 aa22.29■■□□□ 1.16
DFFB-208ENST00000475969 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
DFFB-208ENST00000475969 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
DFFB-208ENST00000475969 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
DFFB-208ENST00000475969 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
DFFB-208ENST00000475969 HECW1Q76N89 1606 aa22.26■■□□□ 1.15
DFFB-208ENST00000475969 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
DFFB-208ENST00000475969 ZNF777Q9ULD5 760 aaPredicted RBP22.24■■□□□ 1.15
DFFB-208ENST00000475969 NEFLP07196 543 aa22.23■■□□□ 1.15
DFFB-208ENST00000475969 ADAMTS12P58397 1594 aa22.23■■□□□ 1.15
DFFB-208ENST00000475969 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
DFFB-208ENST00000475969 C11orf95C9JLR9 678 aaPredicted RBP22.22■■□□□ 1.15
DFFB-208ENST00000475969 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
DFFB-208ENST00000475969 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.15
DFFB-208ENST00000475969 EIF4G2P78344 907 aaKnown RBP eCLIP22.2■■□□□ 1.14
DFFB-208ENST00000475969 WDR62O43379 1518 aa22.19■■□□□ 1.14
DFFB-208ENST00000475969 TCOF1Q13428 1488 aaKnown RBP22.19■■□□□ 1.14
DFFB-208ENST00000475969 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms