RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
CCNL1-216ENST00000475298 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
CCNL1-216ENST00000475298 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
CCNL1-216ENST00000475298 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
CCNL1-216ENST00000475298 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
CCNL1-216ENST00000475298 ITGAEP38570 1179 aa18.95■□□□□ 0.62
CCNL1-216ENST00000475298 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
CCNL1-216ENST00000475298 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
CCNL1-216ENST00000475298 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
CCNL1-216ENST00000475298 TIAM1Q13009 1591 aa18.93■□□□□ 0.62
CCNL1-216ENST00000475298 PRKCSHP14314 528 aaPredicted RBP18.89■□□□□ 0.61
CCNL1-216ENST00000475298 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
CCNL1-216ENST00000475298 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
CCNL1-216ENST00000475298 FHOD3Q2V2M9 1422 aa18.86■□□□□ 0.61
CCNL1-216ENST00000475298 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
CCNL1-216ENST00000475298 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
CCNL1-216ENST00000475298 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
CCNL1-216ENST00000475298 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
CCNL1-216ENST00000475298 PHLDB1Q86UU1 1377 aa18.82■□□□□ 0.6
CCNL1-216ENST00000475298 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
CCNL1-216ENST00000475298 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
CCNL1-216ENST00000475298 CUL7Q14999 1698 aa18.81■□□□□ 0.6
CCNL1-216ENST00000475298 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
CCNL1-216ENST00000475298 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
CCNL1-216ENST00000475298 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
CCNL1-216ENST00000475298 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.59
CCNL1-216ENST00000475298 FAM50AQ14320 339 aaKnown RBP18.75■□□□□ 0.59
CCNL1-216ENST00000475298 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
CCNL1-216ENST00000475298 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
CCNL1-216ENST00000475298 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
CCNL1-216ENST00000475298 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
CCNL1-216ENST00000475298 FYCO1Q9BQS8 1478 aa18.72■□□□□ 0.59
CCNL1-216ENST00000475298 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
CCNL1-216ENST00000475298 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
CCNL1-216ENST00000475298 MAPKBP1O60336 1514 aa18.67■□□□□ 0.58
CCNL1-216ENST00000475298 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
CCNL1-216ENST00000475298 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.583e-8■■■■■ 39.2
CCNL1-216ENST00000475298 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
CCNL1-216ENST00000475298 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
CCNL1-216ENST00000475298 TARBP1Q13395 1621 aaKnown RBP18.61■□□□□ 0.57
CCNL1-216ENST00000475298 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
CCNL1-216ENST00000475298 LRRIQ1Q96JM4 1722 aa18.6■□□□□ 0.57
CCNL1-216ENST00000475298 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
CCNL1-216ENST00000475298 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
CCNL1-216ENST00000475298 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
CCNL1-216ENST00000475298 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
CCNL1-216ENST00000475298 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
CCNL1-216ENST00000475298 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
CCNL1-216ENST00000475298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.49■□□□□ 0.552e-9■□□□□ 10.1
CCNL1-216ENST00000475298 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
CCNL1-216ENST00000475298 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
CCNL1-216ENST00000475298 BCANQ96GW7 911 aa18.47■□□□□ 0.55
CCNL1-216ENST00000475298 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
CCNL1-216ENST00000475298 MSH5O43196 834 aa18.46■□□□□ 0.55
CCNL1-216ENST00000475298 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
CCNL1-216ENST00000475298 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
CCNL1-216ENST00000475298 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
CCNL1-216ENST00000475298 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
CCNL1-216ENST00000475298 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
CCNL1-216ENST00000475298 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
CCNL1-216ENST00000475298 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
CCNL1-216ENST00000475298 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
CCNL1-216ENST00000475298 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
CCNL1-216ENST00000475298 CCDC18Q5T9S5 1454 aa18.41■□□□□ 0.54
CCNL1-216ENST00000475298 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
CCNL1-216ENST00000475298 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.53
CCNL1-216ENST00000475298 UGGT2Q9NYU1 1516 aa18.38■□□□□ 0.53
CCNL1-216ENST00000475298 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
CCNL1-216ENST00000475298 FKBP8Q14318 412 aa18.38■□□□□ 0.53
CCNL1-216ENST00000475298 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
CCNL1-216ENST00000475298 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
CCNL1-216ENST00000475298 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
CCNL1-216ENST00000475298 NAIPQ13075 1403 aa18.35■□□□□ 0.53
CCNL1-216ENST00000475298 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
CCNL1-216ENST00000475298 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
CCNL1-216ENST00000475298 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
CCNL1-216ENST00000475298 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.53
CCNL1-216ENST00000475298 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
CCNL1-216ENST00000475298 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
CCNL1-216ENST00000475298 PPP1R15AO75807 674 aaPredicted RBP18.32■□□□□ 0.52
CCNL1-216ENST00000475298 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
CCNL1-216ENST00000475298 WDR62O43379 1518 aa18.31■□□□□ 0.52
CCNL1-216ENST00000475298 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
CCNL1-216ENST00000475298 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
CCNL1-216ENST00000475298 TONSLQ96HA7 1378 aa18.27■□□□□ 0.52
CCNL1-216ENST00000475298 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
CCNL1-216ENST00000475298 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
CCNL1-216ENST00000475298 DISP1Q96F81 1524 aa18.25■□□□□ 0.51
CCNL1-216ENST00000475298 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
CCNL1-216ENST00000475298 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
CCNL1-216ENST00000475298 KDM6BO15054 1643 aa18.23■□□□□ 0.51
CCNL1-216ENST00000475298 KIAA0556O60303 1618 aa18.23■□□□□ 0.51
CCNL1-216ENST00000475298 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
CCNL1-216ENST00000475298 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
CCNL1-216ENST00000475298 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
CCNL1-216ENST00000475298 TRIM52Q96A61 297 aa18.19■□□□□ 0.5
CCNL1-216ENST00000475298 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
CCNL1-216ENST00000475298 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
CCNL1-216ENST00000475298 NUP153P49790 1475 aaKnown RBP18.19■□□□□ 0.5
CCNL1-216ENST00000475298 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms