RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
SKIV2L-208ENST00000474839 CFTRP13569 1480 aa17.1■□□□□ 0.33
SKIV2L-208ENST00000474839 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
SKIV2L-208ENST00000474839 ANP32CO43423 234 aa17.09■□□□□ 0.33
SKIV2L-208ENST00000474839 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
SKIV2L-208ENST00000474839 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
SKIV2L-208ENST00000474839 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
SKIV2L-208ENST00000474839 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
SKIV2L-208ENST00000474839 CUX1P39880 1505 aa16.99■□□□□ 0.31
SKIV2L-208ENST00000474839 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
SKIV2L-208ENST00000474839 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
SKIV2L-208ENST00000474839 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
SKIV2L-208ENST00000474839 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
SKIV2L-208ENST00000474839 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
SKIV2L-208ENST00000474839 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
SKIV2L-208ENST00000474839 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
SKIV2L-208ENST00000474839 CUX2O14529 1486 aa16.92■□□□□ 0.3
SKIV2L-208ENST00000474839 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
SKIV2L-208ENST00000474839 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
SKIV2L-208ENST00000474839 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
SKIV2L-208ENST00000474839 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
SKIV2L-208ENST00000474839 FBLN2P98095 1184 aa16.89■□□□□ 0.29
SKIV2L-208ENST00000474839 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
SKIV2L-208ENST00000474839 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
SKIV2L-208ENST00000474839 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
SKIV2L-208ENST00000474839 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
SKIV2L-208ENST00000474839 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
SKIV2L-208ENST00000474839 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
SKIV2L-208ENST00000474839 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
SKIV2L-208ENST00000474839 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
SKIV2L-208ENST00000474839 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
SKIV2L-208ENST00000474839 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.29
SKIV2L-208ENST00000474839 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
SKIV2L-208ENST00000474839 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
SKIV2L-208ENST00000474839 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
SKIV2L-208ENST00000474839 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
SKIV2L-208ENST00000474839 IGF1RP08069 1367 aa16.79■□□□□ 0.28
SKIV2L-208ENST00000474839 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
SKIV2L-208ENST00000474839 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
SKIV2L-208ENST00000474839 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
SKIV2L-208ENST00000474839 CCER2I3L3R5 266 aa16.77■□□□□ 0.27
SKIV2L-208ENST00000474839 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
SKIV2L-208ENST00000474839 MSH5O43196 834 aa16.75■□□□□ 0.27
SKIV2L-208ENST00000474839 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
SKIV2L-208ENST00000474839 FOXD1Q16676 465 aa16.73■□□□□ 0.27
SKIV2L-208ENST00000474839 B4GALNT3Q6L9W6 998 aa16.73■□□□□ 0.27
SKIV2L-208ENST00000474839 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■■■■ 30.2
SKIV2L-208ENST00000474839 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
SKIV2L-208ENST00000474839 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
SKIV2L-208ENST00000474839 CCDC184Q52MB2 194 aa16.7■□□□□ 0.26
SKIV2L-208ENST00000474839 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
SKIV2L-208ENST00000474839 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
SKIV2L-208ENST00000474839 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
SKIV2L-208ENST00000474839 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
SKIV2L-208ENST00000474839 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
SKIV2L-208ENST00000474839 NBR1Q14596 966 aa16.66■□□□□ 0.26
SKIV2L-208ENST00000474839 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
SKIV2L-208ENST00000474839 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
SKIV2L-208ENST00000474839 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
SKIV2L-208ENST00000474839 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
SKIV2L-208ENST00000474839 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
SKIV2L-208ENST00000474839 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
SKIV2L-208ENST00000474839 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
SKIV2L-208ENST00000474839 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
SKIV2L-208ENST00000474839 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
SKIV2L-208ENST00000474839 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
SKIV2L-208ENST00000474839 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
SKIV2L-208ENST00000474839 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
SKIV2L-208ENST00000474839 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
SKIV2L-208ENST00000474839 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
SKIV2L-208ENST00000474839 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
SKIV2L-208ENST00000474839 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
SKIV2L-208ENST00000474839 PRDM2Q13029 1718 aa16.52■□□□□ 0.23
SKIV2L-208ENST00000474839 PTPRKQ15262 1439 aa16.51■□□□□ 0.23
SKIV2L-208ENST00000474839 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
SKIV2L-208ENST00000474839 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
SKIV2L-208ENST00000474839 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
SKIV2L-208ENST00000474839 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
SKIV2L-208ENST00000474839 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
SKIV2L-208ENST00000474839 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
SKIV2L-208ENST00000474839 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
SKIV2L-208ENST00000474839 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.22
SKIV2L-208ENST00000474839 DEKP35659 375 aaKnown RBP16.46■□□□□ 0.22
SKIV2L-208ENST00000474839 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
SKIV2L-208ENST00000474839 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
SKIV2L-208ENST00000474839 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
SKIV2L-208ENST00000474839 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
SKIV2L-208ENST00000474839 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
SKIV2L-208ENST00000474839 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
SKIV2L-208ENST00000474839 NAIPQ13075 1403 aa16.4■□□□□ 0.22
SKIV2L-208ENST00000474839 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
SKIV2L-208ENST00000474839 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
SKIV2L-208ENST00000474839 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
SKIV2L-208ENST00000474839 MAP3K1Q13233 1512 aa16.38■□□□□ 0.21
SKIV2L-208ENST00000474839 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
SKIV2L-208ENST00000474839 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
SKIV2L-208ENST00000474839 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
SKIV2L-208ENST00000474839 ANP32AP39687 249 aaKnown RBP16.36■□□□□ 0.21
SKIV2L-208ENST00000474839 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
SKIV2L-208ENST00000474839 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms