RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 DSG3P32926 999 aa10.78□□□□□ -0.68
CPSF7-210ENST00000474684 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
CPSF7-210ENST00000474684 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CPSF7-210ENST00000474684 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
CPSF7-210ENST00000474684 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
CPSF7-210ENST00000474684 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
CPSF7-210ENST00000474684 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
CPSF7-210ENST00000474684 ADAMTS12P58397 1594 aa10.73□□□□□ -0.69
CPSF7-210ENST00000474684 CAPN15O75808 1086 aa10.73□□□□□ -0.69
CPSF7-210ENST00000474684 SYNJ2O15056 1496 aa10.71□□□□□ -0.69
CPSF7-210ENST00000474684 GAPVD1Q14C86 1478 aa10.71□□□□□ -0.69
CPSF7-210ENST00000474684 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-210ENST00000474684 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
CPSF7-210ENST00000474684 NPM3O75607 178 aaKnown RBP10.68□□□□□ -0.7
CPSF7-210ENST00000474684 FBLN2P98095 1184 aa10.68□□□□□ -0.7
CPSF7-210ENST00000474684 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
CPSF7-210ENST00000474684 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-210ENST00000474684 ERCC6L2Q5T890 1561 aa10.65□□□□□ -0.71
CPSF7-210ENST00000474684 GRIN2AQ12879 1464 aa10.64□□□□□ -0.71
CPSF7-210ENST00000474684 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
CPSF7-210ENST00000474684 ERICH3Q5RHP9 1530 aa10.61□□□□□ -0.71
CPSF7-210ENST00000474684 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-210ENST00000474684 NUP160Q12769 1436 aa10.59□□□□□ -0.71
CPSF7-210ENST00000474684 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
CPSF7-210ENST00000474684 CYB5RLQ6IPT4 315 aa10.59□□□□□ -0.71
CPSF7-210ENST00000474684 APLP2Q06481 763 aa10.58□□□□□ -0.72
CPSF7-210ENST00000474684 FHAD1B1AJZ9 1412 aa10.56□□□□□ -0.72
CPSF7-210ENST00000474684 CUL7Q14999 1698 aa10.53□□□□□ -0.72
CPSF7-210ENST00000474684 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
CPSF7-210ENST00000474684 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-210ENST00000474684 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
CPSF7-210ENST00000474684 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
CPSF7-210ENST00000474684 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
CPSF7-210ENST00000474684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
CPSF7-210ENST00000474684 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
CPSF7-210ENST00000474684 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
CPSF7-210ENST00000474684 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
CPSF7-210ENST00000474684 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
CPSF7-210ENST00000474684 IGF1RP08069 1367 aa10.4□□□□□ -0.74
CPSF7-210ENST00000474684 KIAA0586Q9BVV6 1533 aa10.39□□□□□ -0.75
CPSF7-210ENST00000474684 IQGAP2Q13576 1575 aa10.39□□□□□ -0.75
CPSF7-210ENST00000474684 DIP2BQ9P265 1576 aa10.37□□□□□ -0.75
CPSF7-210ENST00000474684 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
CPSF7-210ENST00000474684 ABCB7O75027 752 aa10.36□□□□□ -0.75
CPSF7-210ENST00000474684 MAPKBP1O60336 1514 aa10.35□□□□□ -0.75
CPSF7-210ENST00000474684 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
CPSF7-210ENST00000474684 CARMIL1Q5VZK9 1371 aa10.34□□□□□ -0.75
CPSF7-210ENST00000474684 KIAA0556O60303 1618 aa10.33□□□□□ -0.76
CPSF7-210ENST00000474684 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
CPSF7-210ENST00000474684 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
CPSF7-210ENST00000474684 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-210ENST00000474684 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
CPSF7-210ENST00000474684 UGGT2Q9NYU1 1516 aa10.29□□□□□ -0.76
CPSF7-210ENST00000474684 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
CPSF7-210ENST00000474684 ABCC10Q5T3U5 1492 aa10.29□□□□□ -0.76
CPSF7-210ENST00000474684 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
CPSF7-210ENST00000474684 CHRDL2Q6WN34 429 aa10.28□□□□□ -0.76
CPSF7-210ENST00000474684 ZCCHC11Q5TAX3 1644 aaKnown RBP10.27□□□□□ -0.77
CPSF7-210ENST00000474684 KDM6BO15054 1643 aa10.24□□□□□ -0.77
CPSF7-210ENST00000474684 PTPRGP23470 1445 aa10.24□□□□□ -0.77
CPSF7-210ENST00000474684 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
CPSF7-210ENST00000474684 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-210ENST00000474684 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
CPSF7-210ENST00000474684 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
CPSF7-210ENST00000474684 UHRF1BP1LA0JNW5 1464 aa10.22□□□□□ -0.77
CPSF7-210ENST00000474684 MAP3K4Q9Y6R4 1608 aa10.22□□□□□ -0.77
CPSF7-210ENST00000474684 ABCA8O94911 1581 aa10.2□□□□□ -0.78
CPSF7-210ENST00000474684 GLI2P10070 1586 aa10.2□□□□□ -0.78
CPSF7-210ENST00000474684 KDM5BQ9UGL1 1544 aa10.19□□□□□ -0.78
CPSF7-210ENST00000474684 ASXL2Q76L83 1435 aa10.19□□□□□ -0.78
CPSF7-210ENST00000474684 UACAQ9BZF9 1416 aa10.19□□□□□ -0.78
CPSF7-210ENST00000474684 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
CPSF7-210ENST00000474684 PLB1Q6P1J6 1458 aa10.18□□□□□ -0.78
CPSF7-210ENST00000474684 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
CPSF7-210ENST00000474684 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPSF7-210ENST00000474684 SP7Q8TDD2 431 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-210ENST00000474684 EPRSP07814 1512 aaKnown RBP10.15□□□□□ -0.78
CPSF7-210ENST00000474684 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.79
CPSF7-210ENST00000474684 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
CPSF7-210ENST00000474684 KIF21BO75037 1637 aa10.13□□□□□ -0.79
CPSF7-210ENST00000474684 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
CPSF7-210ENST00000474684 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
CPSF7-210ENST00000474684 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-210ENST00000474684 EEA1Q15075 1411 aa10.07□□□□□ -0.8
CPSF7-210ENST00000474684 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
CPSF7-210ENST00000474684 LRRIQ1Q96JM4 1722 aa10.05□□□□□ -0.8
CPSF7-210ENST00000474684 POLA2Q14181 598 aa10.05□□□□□ -0.8
CPSF7-210ENST00000474684 FHOD3Q2V2M9 1422 aa10.05□□□□□ -0.8
CPSF7-210ENST00000474684 TEX14Q8IWB6 1497 aa10.04□□□□□ -0.8
CPSF7-210ENST00000474684 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
CPSF7-210ENST00000474684 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
CPSF7-210ENST00000474684 ATP10BO94823 1461 aa10.04□□□□□ -0.8
CPSF7-210ENST00000474684 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
CPSF7-210ENST00000474684 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
CPSF7-210ENST00000474684 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.8
CPSF7-210ENST00000474684 MAGI3Q5TCQ9 1506 aa10.02□□□□□ -0.8
CPSF7-210ENST00000474684 ARID3CA6NKF2 412 aa10.02□□□□□ -0.81
CPSF7-210ENST00000474684 KCNA4P22459 653 aa10.02□□□□□ -0.81
CPSF7-210ENST00000474684 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-210ENST00000474684 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms