RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 RIMBP3BA6NNM3 1639 aa42■■■■■ 4.31
RFWD2-207ENST00000474194 RIMBP3Q9UFD9 1639 aa42■■■■■ 4.31
RFWD2-207ENST00000474194 KIAA0586Q9BVV6 1533 aa41.96■■■■■ 4.31
RFWD2-207ENST00000474194 SHROOM2Q13796 1616 aa41.96■■■■■ 4.31
RFWD2-207ENST00000474194 KIF21BO75037 1637 aa41.85■■■■■ 4.29
RFWD2-207ENST00000474194 IQGAP2Q13576 1575 aa41.82■■■■■ 4.29
RFWD2-207ENST00000474194 CTTNBP2Q8WZ74 1663 aa41.81■■■■■ 4.28
RFWD2-207ENST00000474194 JPH4Q96JJ6 628 aa41.81■■■■■ 4.28
RFWD2-207ENST00000474194 ERCC6L2Q5T890 1561 aa41.8■■■■■ 4.28
RFWD2-207ENST00000474194 PRG4Q92954 1404 aaPredicted RBP41.74■■■■■ 4.27
RFWD2-207ENST00000474194 ARAP1Q96P48 1450 aa41.72■■■■■ 4.27
RFWD2-207ENST00000474194 GOLGA3Q08378 1498 aa41.6■■■■■ 4.25
RFWD2-207ENST00000474194 UGGT2Q9NYU1 1516 aa41.6■■■■■ 4.25
RFWD2-207ENST00000474194 CYB5RLQ6IPT4 315 aa41.55■■■■■ 4.24
RFWD2-207ENST00000474194 EHMT2Q96KQ7 1210 aa41.54■■■■■ 4.24
RFWD2-207ENST00000474194 DISP1Q96F81 1524 aa41.5■■■■■ 4.23
RFWD2-207ENST00000474194 CARMIL2Q6F5E8 1435 aa41.47■■■■■ 4.23
RFWD2-207ENST00000474194 KIAA0556O60303 1618 aa41.44■■■■■ 4.22
RFWD2-207ENST00000474194 UBTFP17480 764 aaKnown RBP41.41■■■■■ 4.22
RFWD2-207ENST00000474194 TNIKQ9UKE5 1360 aa41.33■■■■■ 4.21
RFWD2-207ENST00000474194 SAMD9Q5K651 1589 aa41.29■■■■■ 4.2
RFWD2-207ENST00000474194 PTPRGP23470 1445 aa41.27■■■■■ 4.2
RFWD2-207ENST00000474194 RANGAP1P46060 587 aaPredicted RBP41.22■■■■■ 4.19
RFWD2-207ENST00000474194 TTBK1Q5TCY1 1321 aaPredicted RBP41.2■■■■■ 4.19
RFWD2-207ENST00000474194 EFCAB5A4FU69 1503 aa41.14■■■■■ 4.18
RFWD2-207ENST00000474194 P3H3Q8IVL6 736 aa41.13■■■■■ 4.17
RFWD2-207ENST00000474194 ADCY10Q96PN6 1610 aa41.11■■■■■ 4.17
RFWD2-207ENST00000474194 FHOD3Q2V2M9 1422 aa41.04■■■■■ 4.16
RFWD2-207ENST00000474194 UACAQ9BZF9 1416 aa41.02■■■■■ 4.16
RFWD2-207ENST00000474194 ARHGAP35Q9NRY4 1499 aa41.02■■■■■ 4.16
RFWD2-207ENST00000474194 LOC105371045A0A1W2PR82 267 aa41■■■■■ 4.15
RFWD2-207ENST00000474194 UHRF1BP1LA0JNW5 1464 aa40.98■■■■■ 4.15
RFWD2-207ENST00000474194 ABCC2Q92887 1545 aa40.98■■■■■ 4.15
RFWD2-207ENST00000474194 PLB1Q6P1J6 1458 aa40.96■■■■■ 4.15
RFWD2-207ENST00000474194 ABCA8O94911 1581 aa40.95■■■■■ 4.15
RFWD2-207ENST00000474194 CLIP1P30622 1438 aa40.86■■■■■ 4.13
RFWD2-207ENST00000474194 NPM1P06748 294 aaKnown RBP eCLIP40.81■■■■■ 4.12
RFWD2-207ENST00000474194 RAPGEF6Q8TEU7 1601 aa40.81■■■■■ 4.12
RFWD2-207ENST00000474194 KDM5BQ9UGL1 1544 aa40.78■■■■■ 4.12
RFWD2-207ENST00000474194 CEP162Q5TB80 1403 aa40.78■■■■■ 4.12
RFWD2-207ENST00000474194 MAPKBP1O60336 1514 aa40.75■■■■■ 4.11
RFWD2-207ENST00000474194 ZCCHC11Q5TAX3 1644 aaKnown RBP40.75■■■■■ 4.11
RFWD2-207ENST00000474194 FMN1Q68DA7 1419 aa40.73■■■■■ 4.11
RFWD2-207ENST00000474194 NUP153P49790 1475 aaKnown RBP40.65■■■■■ 4.1
RFWD2-207ENST00000474194 ATP10BO94823 1461 aa40.59■■■■■ 4.09
RFWD2-207ENST00000474194 ARID3CA6NKF2 412 aa40.58■■■■■ 4.09
RFWD2-207ENST00000474194 ASXL2Q76L83 1435 aa40.58■■■■■ 4.09
RFWD2-207ENST00000474194 TRHP20396 242 aaPredicted RBP40.55■■■■■ 4.08
RFWD2-207ENST00000474194 HECW1Q76N89 1606 aa40.53■■■■■ 4.08
RFWD2-207ENST00000474194 PCF11O94913 1555 aaKnown RBP40.52■■■■■ 4.08
RFWD2-207ENST00000474194 ABCC10Q5T3U5 1492 aa40.5■■■■■ 4.07
RFWD2-207ENST00000474194 KIF13AQ9H1H9 1805 aa40.49■■■■■ 4.07
RFWD2-207ENST00000474194 DIP2BQ9P265 1576 aa40.48■■■■■ 4.07
RFWD2-207ENST00000474194 CASKIN1Q8WXD9 1431 aa40.47■■■■■ 4.07
RFWD2-207ENST00000474194 WDR7Q9Y4E6 1490 aa40.45■■■■■ 4.07
RFWD2-207ENST00000474194 ATP1B4Q9UN42 357 aaPredicted RBP40.42■■■■■ 4.06
RFWD2-207ENST00000474194 LRRIQ1Q96JM4 1722 aa40.42■■■■■ 4.06
RFWD2-207ENST00000474194 EPRSP07814 1512 aaKnown RBP40.42■■■■■ 4.06
RFWD2-207ENST00000474194 CDK13Q14004 1512 aaKnown RBP40.42■■■■■ 4.06
RFWD2-207ENST00000474194 FYCO1Q9BQS8 1478 aa40.4■■■■■ 4.06
RFWD2-207ENST00000474194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.38■■■■■ 4.05
RFWD2-207ENST00000474194 HNRNPUL2Q1KMD3 747 aaKnown RBP40.38■■■■■ 4.05
RFWD2-207ENST00000474194 FAM69CQ0P6D2 419 aa40.35■■■■■ 4.05
RFWD2-207ENST00000474194 GLI2P10070 1586 aa40.31■■■■■ 4.04
RFWD2-207ENST00000474194 CCDC18Q5T9S5 1454 aa40.26■■■■■ 4.04
RFWD2-207ENST00000474194 VPS8Q8N3P4 1428 aa40.26■■■■■ 4.04
RFWD2-207ENST00000474194 KCNH8Q96L42 1107 aa40.22■■■■■ 4.03
RFWD2-207ENST00000474194 PLEKHD1A6NEE1 506 aa40.2■■■■■ 4.03
RFWD2-207ENST00000474194 MAP3K4Q9Y6R4 1608 aa40.16■■■■■ 4.02
RFWD2-207ENST00000474194 TSPOAP1O95153 1857 aa40.13■■■■■ 4.02
RFWD2-207ENST00000474194 CDK11AQ9UQ88 783 aaPredicted RBP40.11■■■■■ 4.01
RFWD2-207ENST00000474194 CFAP43Q8NDM7 1665 aa40.11■■■■■ 4.01
RFWD2-207ENST00000474194 ABCA9Q8IUA7 1624 aa40.09■■■■■ 4.01
RFWD2-207ENST00000474194 MAGI3Q5TCQ9 1506 aa40.07■■■■■ 4.01
RFWD2-207ENST00000474194 PPRC1Q5VV67 1664 aaKnown RBP40.07■■■■■ 4
RFWD2-207ENST00000474194 TROQ12816 1431 aaPredicted RBP40.07■■■■■ 4
RFWD2-207ENST00000474194 CD109Q6YHK3 1445 aa40■■■■□ 3.99
RFWD2-207ENST00000474194 KIF14Q15058 1648 aa40■■■■□ 3.99
RFWD2-207ENST00000474194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40■■■■□ 3.99
RFWD2-207ENST00000474194 TTC37Q6PGP7 1564 aa39.97■■■■□ 3.99
RFWD2-207ENST00000474194 TIAM1Q13009 1591 aa39.95■■■■□ 3.99
RFWD2-207ENST00000474194 TEX14Q8IWB6 1497 aa39.88■■■■□ 3.98
RFWD2-207ENST00000474194 MTUS2Q5JR59 1369 aa39.86■■■■□ 3.97
RFWD2-207ENST00000474194 MAP3K1Q13233 1512 aa39.86■■■■□ 3.97
RFWD2-207ENST00000474194 EHBP1L1Q8N3D4 1523 aa39.86■■■■□ 3.97
RFWD2-207ENST00000474194 MYO5CQ9NQX4 1742 aa39.79■■■■□ 3.96
RFWD2-207ENST00000474194 LRRC9Q6ZRR7 1453 aa39.75■■■■□ 3.95
RFWD2-207ENST00000474194 PLCH2O75038 1416 aa39.74■■■■□ 3.95
RFWD2-207ENST00000474194 KDM6BO15054 1643 aa39.72■■■■□ 3.95
RFWD2-207ENST00000474194 APLP2Q06481 763 aa39.7■■■■□ 3.95
RFWD2-207ENST00000474194 ARAP3Q8WWN8 1544 aa39.69■■■■□ 3.94
RFWD2-207ENST00000474194 NEO1Q92859 1461 aa39.68■■■■□ 3.94
RFWD2-207ENST00000474194 KANK4Q5T7N3 995 aaPredicted RBP39.68■■■■□ 3.94
RFWD2-207ENST00000474194 CDC42BPAQ5VT25 1732 aa39.68■■■■□ 3.94
RFWD2-207ENST00000474194 PREX2Q70Z35 1606 aa39.66■■■■□ 3.94
RFWD2-207ENST00000474194 SUPT6HQ7KZ85 1726 aaKnown RBP39.66■■■■□ 3.94
RFWD2-207ENST00000474194 FANCAO15360 1455 aa39.66■■■■□ 3.94
RFWD2-207ENST00000474194 CDC42BPBQ9Y5S2 1711 aa39.65■■■■□ 3.94
RFWD2-207ENST00000474194 CFAP74Q9C0B2 1584 aa39.65■■■■□ 3.94
RFWD2-207ENST00000474194 COL17A1Q9UMD9 1497 aaPredicted RBP39.64■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms