RNA–Protein interactions for RNA: ENST00000473909.5

NMD3-207, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 2

Gene NMD3, Length 600 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-207ENST00000473909 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
NMD3-207ENST00000473909 TRIM26Q12899 539 aaPredicted RBP11.9□□□□□ -0.5
NMD3-207ENST00000473909 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
NMD3-207ENST00000473909 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
NMD3-207ENST00000473909 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
NMD3-207ENST00000473909 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
NMD3-207ENST00000473909 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
NMD3-207ENST00000473909 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
NMD3-207ENST00000473909 WDR62O43379 1518 aa11.84□□□□□ -0.51
NMD3-207ENST00000473909 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
NMD3-207ENST00000473909 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
NMD3-207ENST00000473909 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
NMD3-207ENST00000473909 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■■■□□ 17.4
NMD3-207ENST00000473909 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
NMD3-207ENST00000473909 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
NMD3-207ENST00000473909 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
NMD3-207ENST00000473909 CUL7Q14999 1698 aa11.78□□□□□ -0.52
NMD3-207ENST00000473909 PBRM1Q86U86 1689 aa11.77□□□□□ -0.53
NMD3-207ENST00000473909 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
NMD3-207ENST00000473909 HRCP23327 699 aa11.73□□□□□ -0.53
NMD3-207ENST00000473909 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
NMD3-207ENST00000473909 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.54
NMD3-207ENST00000473909 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
NMD3-207ENST00000473909 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
NMD3-207ENST00000473909 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
NMD3-207ENST00000473909 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
NMD3-207ENST00000473909 FHAD1B1AJZ9 1412 aa11.68□□□□□ -0.54
NMD3-207ENST00000473909 FHOD3Q2V2M9 1422 aa11.68□□□□□ -0.54
NMD3-207ENST00000473909 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
NMD3-207ENST00000473909 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
NMD3-207ENST00000473909 APLP2Q06481 763 aa11.61□□□□□ -0.55
NMD3-207ENST00000473909 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
NMD3-207ENST00000473909 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
NMD3-207ENST00000473909 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
NMD3-207ENST00000473909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
NMD3-207ENST00000473909 GRIN2AQ12879 1464 aa11.57□□□□□ -0.56
NMD3-207ENST00000473909 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
NMD3-207ENST00000473909 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
NMD3-207ENST00000473909 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
NMD3-207ENST00000473909 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
NMD3-207ENST00000473909 ATP1B4Q9UN42 357 aaPredicted RBP11.55□□□□□ -0.56
NMD3-207ENST00000473909 MAGI1Q96QZ7 1491 aaPredicted RBP11.55□□□□□ -0.56
NMD3-207ENST00000473909 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
NMD3-207ENST00000473909 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
NMD3-207ENST00000473909 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
NMD3-207ENST00000473909 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
NMD3-207ENST00000473909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
NMD3-207ENST00000473909 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
NMD3-207ENST00000473909 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
NMD3-207ENST00000473909 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
NMD3-207ENST00000473909 UGGT2Q9NYU1 1516 aa11.53□□□□□ -0.56
NMD3-207ENST00000473909 LRRC9Q6ZRR7 1453 aa11.52□□□□□ -0.56
NMD3-207ENST00000473909 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.56
NMD3-207ENST00000473909 KIAA0586Q9BVV6 1533 aa11.52□□□□□ -0.57
NMD3-207ENST00000473909 FBLN2P98095 1184 aa11.52□□□□□ -0.57
NMD3-207ENST00000473909 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
NMD3-207ENST00000473909 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
NMD3-207ENST00000473909 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
NMD3-207ENST00000473909 NUP160Q12769 1436 aa11.49□□□□□ -0.57
NMD3-207ENST00000473909 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
NMD3-207ENST00000473909 RRBP1Q9P2E9 1410 aaKnown RBP11.48□□□□□ -0.57
NMD3-207ENST00000473909 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
NMD3-207ENST00000473909 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
NMD3-207ENST00000473909 CHD1O14646 1710 aa11.45□□□□□ -0.58
NMD3-207ENST00000473909 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
NMD3-207ENST00000473909 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
NMD3-207ENST00000473909 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
NMD3-207ENST00000473909 CDK13Q14004 1512 aaKnown RBP11.43□□□□□ -0.58
NMD3-207ENST00000473909 CCNB3Q8WWL7 1395 aa11.42□□□□□ -0.58
NMD3-207ENST00000473909 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
NMD3-207ENST00000473909 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
NMD3-207ENST00000473909 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
NMD3-207ENST00000473909 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.59
NMD3-207ENST00000473909 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
NMD3-207ENST00000473909 ITGAEP38570 1179 aa11.39□□□□□ -0.59
NMD3-207ENST00000473909 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
NMD3-207ENST00000473909 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
NMD3-207ENST00000473909 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
NMD3-207ENST00000473909 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
NMD3-207ENST00000473909 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
NMD3-207ENST00000473909 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
NMD3-207ENST00000473909 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
NMD3-207ENST00000473909 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
NMD3-207ENST00000473909 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
NMD3-207ENST00000473909 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
NMD3-207ENST00000473909 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
NMD3-207ENST00000473909 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
NMD3-207ENST00000473909 SUPT6HQ7KZ85 1726 aaKnown RBP11.33□□□□□ -0.6
NMD3-207ENST00000473909 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
NMD3-207ENST00000473909 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
NMD3-207ENST00000473909 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
NMD3-207ENST00000473909 ABCA8O94911 1581 aa11.32□□□□□ -0.6
NMD3-207ENST00000473909 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
NMD3-207ENST00000473909 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
NMD3-207ENST00000473909 DHX57Q6P158 1386 aaKnown RBP11.29□□□□□ -0.6
NMD3-207ENST00000473909 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
NMD3-207ENST00000473909 ATP10BO94823 1461 aa11.27□□□□□ -0.6
NMD3-207ENST00000473909 ZBTB22O15209 634 aa11.27□□□□□ -0.61
NMD3-207ENST00000473909 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
NMD3-207ENST00000473909 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms