RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
TRAIP-204ENST00000473863 CHD1O14646 1710 aa21.92■■□□□ 1.1
TRAIP-204ENST00000473863 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
TRAIP-204ENST00000473863 NUP160Q12769 1436 aa21.83■■□□□ 1.09
TRAIP-204ENST00000473863 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
TRAIP-204ENST00000473863 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
TRAIP-204ENST00000473863 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
TRAIP-204ENST00000473863 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
TRAIP-204ENST00000473863 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
TRAIP-204ENST00000473863 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
TRAIP-204ENST00000473863 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
TRAIP-204ENST00000473863 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
TRAIP-204ENST00000473863 FBLN2P98095 1184 aa21.69■■□□□ 1.06
TRAIP-204ENST00000473863 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
TRAIP-204ENST00000473863 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
TRAIP-204ENST00000473863 UGGT2Q9NYU1 1516 aa21.65■■□□□ 1.06
TRAIP-204ENST00000473863 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
TRAIP-204ENST00000473863 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
TRAIP-204ENST00000473863 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
TRAIP-204ENST00000473863 CEP162Q5TB80 1403 aa21.61■■□□□ 1.05
TRAIP-204ENST00000473863 ILDR1Q86SU0 546 aaPredicted RBP21.6■■□□□ 1.05
TRAIP-204ENST00000473863 CLIP1P30622 1438 aa21.55■■□□□ 1.04
TRAIP-204ENST00000473863 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
TRAIP-204ENST00000473863 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
TRAIP-204ENST00000473863 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
TRAIP-204ENST00000473863 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
TRAIP-204ENST00000473863 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
TRAIP-204ENST00000473863 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
TRAIP-204ENST00000473863 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
TRAIP-204ENST00000473863 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
TRAIP-204ENST00000473863 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
TRAIP-204ENST00000473863 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
TRAIP-204ENST00000473863 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
TRAIP-204ENST00000473863 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
TRAIP-204ENST00000473863 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
TRAIP-204ENST00000473863 ABCA8O94911 1581 aa21.26■□□□□ 0.99
TRAIP-204ENST00000473863 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
TRAIP-204ENST00000473863 PTPRGP23470 1445 aa21.24■□□□□ 0.99
TRAIP-204ENST00000473863 CASKIN1Q8WXD9 1431 aa21.24■□□□□ 0.99
TRAIP-204ENST00000473863 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
TRAIP-204ENST00000473863 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
TRAIP-204ENST00000473863 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
TRAIP-204ENST00000473863 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
TRAIP-204ENST00000473863 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
TRAIP-204ENST00000473863 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
TRAIP-204ENST00000473863 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
TRAIP-204ENST00000473863 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
TRAIP-204ENST00000473863 MAP3K1Q13233 1512 aa21.14■□□□□ 0.98
TRAIP-204ENST00000473863 NUP153P49790 1475 aaKnown RBP21.14■□□□□ 0.98
TRAIP-204ENST00000473863 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
TRAIP-204ENST00000473863 ADCY10Q96PN6 1610 aa21.12■□□□□ 0.97
TRAIP-204ENST00000473863 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
TRAIP-204ENST00000473863 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
TRAIP-204ENST00000473863 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
TRAIP-204ENST00000473863 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
TRAIP-204ENST00000473863 ZCCHC11Q5TAX3 1644 aaKnown RBP21.03■□□□□ 0.96
TRAIP-204ENST00000473863 CDK13Q14004 1512 aaKnown RBP21.03■□□□□ 0.96
TRAIP-204ENST00000473863 TTBK1Q5TCY1 1321 aaPredicted RBP21.03■□□□□ 0.96
TRAIP-204ENST00000473863 ATP10BO94823 1461 aa21.01■□□□□ 0.95
TRAIP-204ENST00000473863 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
TRAIP-204ENST00000473863 LRRC9Q6ZRR7 1453 aa20.95■□□□□ 0.94
TRAIP-204ENST00000473863 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
TRAIP-204ENST00000473863 APLP2Q06481 763 aa20.92■□□□□ 0.94
TRAIP-204ENST00000473863 MAPKBP1O60336 1514 aa20.91■□□□□ 0.94
TRAIP-204ENST00000473863 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
TRAIP-204ENST00000473863 TROQ12816 1431 aaPredicted RBP20.89■□□□□ 0.94
TRAIP-204ENST00000473863 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
TRAIP-204ENST00000473863 SUPT6HQ7KZ85 1726 aaKnown RBP20.87■□□□□ 0.93
TRAIP-204ENST00000473863 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
TRAIP-204ENST00000473863 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
TRAIP-204ENST00000473863 KIF14Q15058 1648 aa20.86■□□□□ 0.93
TRAIP-204ENST00000473863 KIF13AQ9H1H9 1805 aa20.84■□□□□ 0.93
TRAIP-204ENST00000473863 ASXL2Q76L83 1435 aa20.82■□□□□ 0.92
TRAIP-204ENST00000473863 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
TRAIP-204ENST00000473863 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
TRAIP-204ENST00000473863 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRAIP-204ENST00000473863 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
TRAIP-204ENST00000473863 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
TRAIP-204ENST00000473863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
TRAIP-204ENST00000473863 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
TRAIP-204ENST00000473863 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
TRAIP-204ENST00000473863 ABCA9Q8IUA7 1624 aa20.75■□□□□ 0.91
TRAIP-204ENST00000473863 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
TRAIP-204ENST00000473863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAIP-204ENST00000473863 TTC37Q6PGP7 1564 aa20.73■□□□□ 0.91
TRAIP-204ENST00000473863 GLI2P10070 1586 aa20.72■□□□□ 0.91
TRAIP-204ENST00000473863 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
TRAIP-204ENST00000473863 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
TRAIP-204ENST00000473863 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
TRAIP-204ENST00000473863 MYO5CQ9NQX4 1742 aa20.7■□□□□ 0.9
TRAIP-204ENST00000473863 ARAP3Q8WWN8 1544 aa20.69■□□□□ 0.9
TRAIP-204ENST00000473863 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
TRAIP-204ENST00000473863 PHLDB1Q86UU1 1377 aa20.68■□□□□ 0.9
TRAIP-204ENST00000473863 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
TRAIP-204ENST00000473863 MAP3K4Q9Y6R4 1608 aa20.65■□□□□ 0.9
TRAIP-204ENST00000473863 GPATCH8Q9UKJ3 1502 aaKnown RBP20.64■□□□□ 0.9
TRAIP-204ENST00000473863 FBXO41Q8TF61 875 aa20.64■□□□□ 0.89
TRAIP-204ENST00000473863 MIA2Q96PC5 1412 aa20.63■□□□□ 0.89
TRAIP-204ENST00000473863 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
TRAIP-204ENST00000473863 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms