RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
NOTCH4-203ENST00000473562 ERICH3Q5RHP9 1530 aa18.7■□□□□ 0.58
NOTCH4-203ENST00000473562 NEFLP07196 543 aa18.7■□□□□ 0.58
NOTCH4-203ENST00000473562 CUX2O14529 1486 aa18.69■□□□□ 0.58
NOTCH4-203ENST00000473562 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
NOTCH4-203ENST00000473562 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
NOTCH4-203ENST00000473562 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
NOTCH4-203ENST00000473562 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
NOTCH4-203ENST00000473562 ANP32CO43423 234 aa18.66■□□□□ 0.58
NOTCH4-203ENST00000473562 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
NOTCH4-203ENST00000473562 IGF1RP08069 1367 aa18.64■□□□□ 0.57
NOTCH4-203ENST00000473562 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
NOTCH4-203ENST00000473562 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
NOTCH4-203ENST00000473562 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
NOTCH4-203ENST00000473562 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
NOTCH4-203ENST00000473562 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
NOTCH4-203ENST00000473562 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
NOTCH4-203ENST00000473562 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
NOTCH4-203ENST00000473562 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
NOTCH4-203ENST00000473562 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
NOTCH4-203ENST00000473562 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
NOTCH4-203ENST00000473562 MSH5O43196 834 aa18.52■□□□□ 0.55
NOTCH4-203ENST00000473562 CCDC184Q52MB2 194 aa18.5■□□□□ 0.55
NOTCH4-203ENST00000473562 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
NOTCH4-203ENST00000473562 FOXD1Q16676 465 aa18.48■□□□□ 0.55
NOTCH4-203ENST00000473562 CFTRP13569 1480 aa18.47■□□□□ 0.55
NOTCH4-203ENST00000473562 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
NOTCH4-203ENST00000473562 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
NOTCH4-203ENST00000473562 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
NOTCH4-203ENST00000473562 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
NOTCH4-203ENST00000473562 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
NOTCH4-203ENST00000473562 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
NOTCH4-203ENST00000473562 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
NOTCH4-203ENST00000473562 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
NOTCH4-203ENST00000473562 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
NOTCH4-203ENST00000473562 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
NOTCH4-203ENST00000473562 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.53
NOTCH4-203ENST00000473562 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
NOTCH4-203ENST00000473562 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
NOTCH4-203ENST00000473562 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
NOTCH4-203ENST00000473562 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
NOTCH4-203ENST00000473562 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
NOTCH4-203ENST00000473562 C11orf95C9JLR9 678 aaPredicted RBP18.34■□□□□ 0.53
NOTCH4-203ENST00000473562 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.52
NOTCH4-203ENST00000473562 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
NOTCH4-203ENST00000473562 CADPSQ9ULU8 1353 aa18.31■□□□□ 0.52
NOTCH4-203ENST00000473562 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
NOTCH4-203ENST00000473562 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
NOTCH4-203ENST00000473562 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
NOTCH4-203ENST00000473562 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
NOTCH4-203ENST00000473562 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
NOTCH4-203ENST00000473562 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
NOTCH4-203ENST00000473562 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
NOTCH4-203ENST00000473562 NESP48681 1621 aa18.23■□□□□ 0.51
NOTCH4-203ENST00000473562 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
NOTCH4-203ENST00000473562 NAIPQ13075 1403 aa18.22■□□□□ 0.51
NOTCH4-203ENST00000473562 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
NOTCH4-203ENST00000473562 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
NOTCH4-203ENST00000473562 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
NOTCH4-203ENST00000473562 NBR1Q14596 966 aa18.2■□□□□ 0.5
NOTCH4-203ENST00000473562 CASKIN1Q8WXD9 1431 aa18.2■□□□□ 0.5
NOTCH4-203ENST00000473562 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
NOTCH4-203ENST00000473562 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
NOTCH4-203ENST00000473562 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
NOTCH4-203ENST00000473562 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
NOTCH4-203ENST00000473562 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
NOTCH4-203ENST00000473562 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
NOTCH4-203ENST00000473562 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
NOTCH4-203ENST00000473562 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
NOTCH4-203ENST00000473562 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
NOTCH4-203ENST00000473562 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
NOTCH4-203ENST00000473562 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
NOTCH4-203ENST00000473562 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
NOTCH4-203ENST00000473562 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
NOTCH4-203ENST00000473562 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
NOTCH4-203ENST00000473562 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
NOTCH4-203ENST00000473562 KDM6BO15054 1643 aa18.1■□□□□ 0.49
NOTCH4-203ENST00000473562 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
NOTCH4-203ENST00000473562 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
NOTCH4-203ENST00000473562 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
NOTCH4-203ENST00000473562 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
NOTCH4-203ENST00000473562 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
NOTCH4-203ENST00000473562 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
NOTCH4-203ENST00000473562 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
NOTCH4-203ENST00000473562 KIF7Q2M1P5 1343 aa18.05■□□□□ 0.48
NOTCH4-203ENST00000473562 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
NOTCH4-203ENST00000473562 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
NOTCH4-203ENST00000473562 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
NOTCH4-203ENST00000473562 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
NOTCH4-203ENST00000473562 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
NOTCH4-203ENST00000473562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.48
NOTCH4-203ENST00000473562 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
NOTCH4-203ENST00000473562 DEKP35659 375 aaKnown RBP18.01■□□□□ 0.47
NOTCH4-203ENST00000473562 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
NOTCH4-203ENST00000473562 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
NOTCH4-203ENST00000473562 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
NOTCH4-203ENST00000473562 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
NOTCH4-203ENST00000473562 CCDC136Q96JN2 1154 aa17.97■□□□□ 0.47
NOTCH4-203ENST00000473562 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
NOTCH4-203ENST00000473562 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms