RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
DUBR-203ENST00000473550 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
DUBR-203ENST00000473550 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
DUBR-203ENST00000473550 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
DUBR-203ENST00000473550 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
DUBR-203ENST00000473550 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
DUBR-203ENST00000473550 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
DUBR-203ENST00000473550 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
DUBR-203ENST00000473550 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
DUBR-203ENST00000473550 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
DUBR-203ENST00000473550 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
DUBR-203ENST00000473550 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
DUBR-203ENST00000473550 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
DUBR-203ENST00000473550 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
DUBR-203ENST00000473550 KIAA0586Q9BVV6 1533 aa15.5■□□□□ 0.07
DUBR-203ENST00000473550 NUP160Q12769 1436 aa15.5■□□□□ 0.07
DUBR-203ENST00000473550 FBLN2P98095 1184 aa15.48■□□□□ 0.07
DUBR-203ENST00000473550 CLIP1P30622 1438 aa15.48■□□□□ 0.07
DUBR-203ENST00000473550 IQGAP2Q13576 1575 aa15.48■□□□□ 0.07
DUBR-203ENST00000473550 CHD1O14646 1710 aa15.48■□□□□ 0.07
DUBR-203ENST00000473550 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
DUBR-203ENST00000473550 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
DUBR-203ENST00000473550 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
DUBR-203ENST00000473550 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
DUBR-203ENST00000473550 SAMD9Q5K651 1589 aa15.39■□□□□ 0.05
DUBR-203ENST00000473550 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
DUBR-203ENST00000473550 ARHGAP35Q9NRY4 1499 aa15.37■□□□□ 0.05
DUBR-203ENST00000473550 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
DUBR-203ENST00000473550 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
DUBR-203ENST00000473550 SHROOM2Q13796 1616 aa15.33■□□□□ 0.04
DUBR-203ENST00000473550 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
DUBR-203ENST00000473550 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
DUBR-203ENST00000473550 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
DUBR-203ENST00000473550 FMN1Q68DA7 1419 aa15.32■□□□□ 0.04
DUBR-203ENST00000473550 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
DUBR-203ENST00000473550 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
DUBR-203ENST00000473550 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
DUBR-203ENST00000473550 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
DUBR-203ENST00000473550 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
DUBR-203ENST00000473550 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
DUBR-203ENST00000473550 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
DUBR-203ENST00000473550 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
DUBR-203ENST00000473550 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
DUBR-203ENST00000473550 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.03
DUBR-203ENST00000473550 APLP2Q06481 763 aa15.21■□□□□ 0.03
DUBR-203ENST00000473550 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
DUBR-203ENST00000473550 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
DUBR-203ENST00000473550 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
DUBR-203ENST00000473550 PCF11O94913 1555 aaKnown RBP15.16■□□□□ 0.02
DUBR-203ENST00000473550 PTPRGP23470 1445 aa15.16■□□□□ 0.02
DUBR-203ENST00000473550 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
DUBR-203ENST00000473550 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
DUBR-203ENST00000473550 ABCA8O94911 1581 aa15.11■□□□□ 0.01
DUBR-203ENST00000473550 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
DUBR-203ENST00000473550 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
DUBR-203ENST00000473550 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
DUBR-203ENST00000473550 ERCC6L2Q5T890 1561 aa15.08■□□□□ 0
DUBR-203ENST00000473550 UACAQ9BZF9 1416 aa15.08■□□□□ 0
DUBR-203ENST00000473550 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
DUBR-203ENST00000473550 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
DUBR-203ENST00000473550 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
DUBR-203ENST00000473550 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
DUBR-203ENST00000473550 NUP153P49790 1475 aaKnown RBP15.05■□□□□ -0
DUBR-203ENST00000473550 PLB1Q6P1J6 1458 aa15.05■□□□□ -0
DUBR-203ENST00000473550 ABCC2Q92887 1545 aa15.05■□□□□ -0
DUBR-203ENST00000473550 ARHGEF11O15085 1522 aa15.03■□□□□ -0
DUBR-203ENST00000473550 TTBK1Q5TCY1 1321 aaPredicted RBP15.02■□□□□ -0
DUBR-203ENST00000473550 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
DUBR-203ENST00000473550 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
DUBR-203ENST00000473550 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
DUBR-203ENST00000473550 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
DUBR-203ENST00000473550 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
DUBR-203ENST00000473550 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
DUBR-203ENST00000473550 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
DUBR-203ENST00000473550 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
DUBR-203ENST00000473550 ATP10BO94823 1461 aa14.96□□□□□ -0.01
DUBR-203ENST00000473550 CDK13Q14004 1512 aaKnown RBP14.96□□□□□ -0.02
DUBR-203ENST00000473550 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
DUBR-203ENST00000473550 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
DUBR-203ENST00000473550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
DUBR-203ENST00000473550 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
DUBR-203ENST00000473550 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
DUBR-203ENST00000473550 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
DUBR-203ENST00000473550 TROQ12816 1431 aaPredicted RBP14.92□□□□□ -0.02
DUBR-203ENST00000473550 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
DUBR-203ENST00000473550 TRIM26Q12899 539 aaPredicted RBP14.92□□□□□ -0.02
DUBR-203ENST00000473550 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
DUBR-203ENST00000473550 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
DUBR-203ENST00000473550 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
DUBR-203ENST00000473550 KIF14Q15058 1648 aa14.87□□□□□ -0.03
DUBR-203ENST00000473550 NCOA2Q15596 1464 aa14.87□□□□□ -0.03
DUBR-203ENST00000473550 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
DUBR-203ENST00000473550 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
DUBR-203ENST00000473550 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
DUBR-203ENST00000473550 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.04
DUBR-203ENST00000473550 ITSN2Q9NZM3 1697 aa14.82□□□□□ -0.04
DUBR-203ENST00000473550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.04
DUBR-203ENST00000473550 MIA2Q96PC5 1412 aa14.82□□□□□ -0.04
DUBR-203ENST00000473550 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
DUBR-203ENST00000473550 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms