RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 SCAF1Q9H7N4 1312 aaKnown RBP30.66■■■□□ 2.5
SNX21-209ENST00000472219 LRRC9Q6ZRR7 1453 aa30.65■■■□□ 2.5
SNX21-209ENST00000472219 ACIN1Q9UKV3 1341 aaKnown RBP30.65■■■□□ 2.5
SNX21-209ENST00000472219 CTTNBP2Q8WZ74 1663 aa30.63■■■□□ 2.49
SNX21-209ENST00000472219 WDR97A6NE52 1622 aa30.63■■■□□ 2.49
SNX21-209ENST00000472219 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
SNX21-209ENST00000472219 PCF11O94913 1555 aaKnown RBP30.58■■■□□ 2.49
SNX21-209ENST00000472219 URB2Q14146 1524 aaKnown RBP30.58■■■□□ 2.49
SNX21-209ENST00000472219 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.49
SNX21-209ENST00000472219 FYCO1Q9BQS8 1478 aa30.58■■■□□ 2.49
SNX21-209ENST00000472219 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
SNX21-209ENST00000472219 CASKIN1Q8WXD9 1431 aa30.51■■■□□ 2.48
SNX21-209ENST00000472219 NEUROD1Q13562 356 aa30.47■■■□□ 2.47
SNX21-209ENST00000472219 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
SNX21-209ENST00000472219 FMN1Q68DA7 1419 aa30.47■■■□□ 2.47
SNX21-209ENST00000472219 GAPVD1Q14C86 1478 aa30.43■■■□□ 2.46
SNX21-209ENST00000472219 PHLDB1Q86UU1 1377 aa30.42■■■□□ 2.46
SNX21-209ENST00000472219 P3H3Q8IVL6 736 aa30.4■■■□□ 2.46
SNX21-209ENST00000472219 RAB3GAP2Q9H2M9 1393 aa30.4■■■□□ 2.46
SNX21-209ENST00000472219 ITGAEP38570 1179 aa30.39■■■□□ 2.46
SNX21-209ENST00000472219 SETD5Q9C0A6 1442 aa30.38■■■□□ 2.45
SNX21-209ENST00000472219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.37■■■□□ 2.45
SNX21-209ENST00000472219 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
SNX21-209ENST00000472219 SAMD9Q5K651 1589 aa30.35■■■□□ 2.45
SNX21-209ENST00000472219 ATP1B4Q9UN42 357 aaPredicted RBP30.33■■■□□ 2.45
SNX21-209ENST00000472219 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
SNX21-209ENST00000472219 MIER1Q8N108 512 aa30.3■■■□□ 2.44
SNX21-209ENST00000472219 SNAPC4Q5SXM2 1469 aa30.29■■■□□ 2.44
SNX21-209ENST00000472219 FAM50AQ14320 339 aaKnown RBP30.28■■■□□ 2.44
SNX21-209ENST00000472219 THOC2Q8NI27 1593 aaKnown RBP30.28■■■□□ 2.44
SNX21-209ENST00000472219 TARBP1Q13395 1621 aaKnown RBP30.27■■■□□ 2.44
SNX21-209ENST00000472219 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
SNX21-209ENST00000472219 PELP1Q8IZL8 1130 aaKnown RBP30.21■■■□□ 2.43
SNX21-209ENST00000472219 MTUS2Q5JR59 1369 aa30.17■■■□□ 2.42
SNX21-209ENST00000472219 GTF3C3Q9Y5Q9 886 aa30.17■■■□□ 2.42
SNX21-209ENST00000472219 FGD6Q6ZV73 1430 aa30.16■■■□□ 2.42
SNX21-209ENST00000472219 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
SNX21-209ENST00000472219 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
SNX21-209ENST00000472219 TIMELESSQ9UNS1 1208 aa30.11■■■□□ 2.41
SNX21-209ENST00000472219 MRC2Q9UBG0 1479 aa30.11■■■□□ 2.41
SNX21-209ENST00000472219 EHBP1L1Q8N3D4 1523 aa30.1■■■□□ 2.41
SNX21-209ENST00000472219 YTHDC1Q96MU7 727 aaKnown RBP30.09■■■□□ 2.41
SNX21-209ENST00000472219 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
SNX21-209ENST00000472219 CCDC18Q5T9S5 1454 aa30.08■■■□□ 2.41
SNX21-209ENST00000472219 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
SNX21-209ENST00000472219 LRRIQ1Q96JM4 1722 aa30.06■■■□□ 2.4
SNX21-209ENST00000472219 ADAMTS12P58397 1594 aa30.04■■■□□ 2.4
SNX21-209ENST00000472219 IQGAP2Q13576 1575 aa30.03■■■□□ 2.4
SNX21-209ENST00000472219 MYOM3Q5VTT5 1437 aa30.02■■■□□ 2.4
SNX21-209ENST00000472219 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
SNX21-209ENST00000472219 HECW1Q76N89 1606 aa30■■■□□ 2.39
SNX21-209ENST00000472219 HFM1A2PYH4 1435 aa29.96■■■□□ 2.39
SNX21-209ENST00000472219 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
SNX21-209ENST00000472219 UGGT2Q9NYU1 1516 aa29.93■■■□□ 2.38
SNX21-209ENST00000472219 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
SNX21-209ENST00000472219 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
SNX21-209ENST00000472219 WDR62O43379 1518 aa29.88■■■□□ 2.37
SNX21-209ENST00000472219 UACAQ9BZF9 1416 aa29.87■■■□□ 2.37
SNX21-209ENST00000472219 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
SNX21-209ENST00000472219 EPRSP07814 1512 aaKnown RBP29.82■■■□□ 2.37
SNX21-209ENST00000472219 TCOF1Q13428 1488 aaKnown RBP29.82■■■□□ 2.36
SNX21-209ENST00000472219 PTPRKQ15262 1439 aa29.81■■■□□ 2.36
SNX21-209ENST00000472219 MAGI3Q5TCQ9 1506 aa29.8■■■□□ 2.36
SNX21-209ENST00000472219 NAIPQ13075 1403 aa29.79■■■□□ 2.36
SNX21-209ENST00000472219 MIA2Q96PC5 1412 aa29.76■■■□□ 2.35
SNX21-209ENST00000472219 KIAA0586Q9BVV6 1533 aa29.76■■■□□ 2.35
SNX21-209ENST00000472219 AKNAQ7Z591 1439 aa29.75■■■□□ 2.35
SNX21-209ENST00000472219 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
SNX21-209ENST00000472219 TONSLQ96HA7 1378 aa29.72■■■□□ 2.35
SNX21-209ENST00000472219 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
SNX21-209ENST00000472219 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
SNX21-209ENST00000472219 KIAA0556O60303 1618 aa29.69■■■□□ 2.34
SNX21-209ENST00000472219 CDK13Q14004 1512 aaKnown RBP29.65■■■□□ 2.34
SNX21-209ENST00000472219 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
SNX21-209ENST00000472219 GRIN2AQ12879 1464 aa29.65■■■□□ 2.34
SNX21-209ENST00000472219 DISP1Q96F81 1524 aa29.61■■■□□ 2.33
SNX21-209ENST00000472219 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
SNX21-209ENST00000472219 RAPGEF6Q8TEU7 1601 aa29.57■■■□□ 2.32
SNX21-209ENST00000472219 ERCC6Q03468 1493 aa29.57■■■□□ 2.32
SNX21-209ENST00000472219 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
SNX21-209ENST00000472219 NUP153P49790 1475 aaKnown RBP29.51■■■□□ 2.31
SNX21-209ENST00000472219 DDX10Q13206 875 aaKnown RBP29.51■■■□□ 2.31
SNX21-209ENST00000472219 RRP7BPQ9NSQ0 103 aa29.51■■■□□ 2.31
SNX21-209ENST00000472219 ROCK1Q13464 1354 aa29.49■■■□□ 2.31
SNX21-209ENST00000472219 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
SNX21-209ENST00000472219 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
SNX21-209ENST00000472219 DNMT1P26358 1616 aaKnown RBP29.45■■■□□ 2.31
SNX21-209ENST00000472219 DAPK1P53355 1430 aa29.43■■■□□ 2.3
SNX21-209ENST00000472219 TRIM52Q96A61 297 aa29.42■■■□□ 2.3
SNX21-209ENST00000472219 CHMP7Q8WUX9 453 aaPredicted RBP29.41■■■□□ 2.3
SNX21-209ENST00000472219 CEP170Q5SW79 1584 aa29.39■■■□□ 2.3
SNX21-209ENST00000472219 CCER2I3L3R5 266 aa29.39■■■□□ 2.3
SNX21-209ENST00000472219 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.29
SNX21-209ENST00000472219 CARMIL2Q6F5E8 1435 aa29.39■■■□□ 2.29
SNX21-209ENST00000472219 ARID3CA6NKF2 412 aa29.38■■■□□ 2.29
SNX21-209ENST00000472219 ITSN2Q9NZM3 1697 aa29.38■■■□□ 2.29
SNX21-209ENST00000472219 ANP32CO43423 234 aa29.38■■■□□ 2.29
SNX21-209ENST00000472219 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
SNX21-209ENST00000472219 KDM6BO15054 1643 aa29.37■■■□□ 2.29
SNX21-209ENST00000472219 DENND4BO75064 1496 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms