RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.37
HOXB3-205ENST00000470495 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
HOXB3-205ENST00000470495 MTUS2Q5JR59 1369 aa23.57■■□□□ 1.36
HOXB3-205ENST00000470495 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
HOXB3-205ENST00000470495 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
HOXB3-205ENST00000470495 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
HOXB3-205ENST00000470495 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
HOXB3-205ENST00000470495 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
HOXB3-205ENST00000470495 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
HOXB3-205ENST00000470495 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
HOXB3-205ENST00000470495 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
HOXB3-205ENST00000470495 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
HOXB3-205ENST00000470495 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.34
HOXB3-205ENST00000470495 MIER1Q8N108 512 aa23.38■■□□□ 1.33
HOXB3-205ENST00000470495 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
HOXB3-205ENST00000470495 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
HOXB3-205ENST00000470495 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
HOXB3-205ENST00000470495 PODXL2Q9NZ53 605 aa23.35■■□□□ 1.33
HOXB3-205ENST00000470495 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
HOXB3-205ENST00000470495 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
HOXB3-205ENST00000470495 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
HOXB3-205ENST00000470495 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
HOXB3-205ENST00000470495 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
HOXB3-205ENST00000470495 DAXXQ9UER7 740 aaPredicted RBP23.28■■□□□ 1.32
HOXB3-205ENST00000470495 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
HOXB3-205ENST00000470495 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
HOXB3-205ENST00000470495 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
HOXB3-205ENST00000470495 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
HOXB3-205ENST00000470495 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
HOXB3-205ENST00000470495 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
HOXB3-205ENST00000470495 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
HOXB3-205ENST00000470495 GLIPR1L2Q4G1C9 344 aa23.22■■□□□ 1.31
HOXB3-205ENST00000470495 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
HOXB3-205ENST00000470495 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
HOXB3-205ENST00000470495 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
HOXB3-205ENST00000470495 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
HOXB3-205ENST00000470495 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.33e-7■■■■□ 23.1
HOXB3-205ENST00000470495 SETD5Q9C0A6 1442 aa23.19■■□□□ 1.3
HOXB3-205ENST00000470495 DDX10Q13206 875 aaKnown RBP23.18■■□□□ 1.3
HOXB3-205ENST00000470495 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.17■■□□□ 1.3
HOXB3-205ENST00000470495 PHLDB1Q86UU1 1377 aa23.16■■□□□ 1.3
HOXB3-205ENST00000470495 PLEKHG5O94827 1062 aa23.14■■□□□ 1.3
HOXB3-205ENST00000470495 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.29
HOXB3-205ENST00000470495 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
HOXB3-205ENST00000470495 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
HOXB3-205ENST00000470495 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
HOXB3-205ENST00000470495 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
HOXB3-205ENST00000470495 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
HOXB3-205ENST00000470495 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
HOXB3-205ENST00000470495 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
HOXB3-205ENST00000470495 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
HOXB3-205ENST00000470495 BCANQ96GW7 911 aa23.03■■□□□ 1.28
HOXB3-205ENST00000470495 ANP32CO43423 234 aa23.03■■□□□ 1.28
HOXB3-205ENST00000470495 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
HOXB3-205ENST00000470495 PKNOX2Q96KN3 472 aa23■■□□□ 1.27
HOXB3-205ENST00000470495 NEFLP07196 543 aa22.99■■□□□ 1.27
HOXB3-205ENST00000470495 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
HOXB3-205ENST00000470495 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
HOXB3-205ENST00000470495 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
HOXB3-205ENST00000470495 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
HOXB3-205ENST00000470495 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
HOXB3-205ENST00000470495 FYCO1Q9BQS8 1478 aa22.91■■□□□ 1.26
HOXB3-205ENST00000470495 FOXD1Q16676 465 aa22.9■■□□□ 1.26
HOXB3-205ENST00000470495 A0A0U1RQG5 324 aaPredicted RBP22.9■■□□□ 1.26
HOXB3-205ENST00000470495 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
HOXB3-205ENST00000470495 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
HOXB3-205ENST00000470495 FGD6Q6ZV73 1430 aa22.88■■□□□ 1.25
HOXB3-205ENST00000470495 GRIN2BQ13224 1484 aa22.88■■□□□ 1.25
HOXB3-205ENST00000470495 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
HOXB3-205ENST00000470495 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
HOXB3-205ENST00000470495 EFCAB5A4FU69 1503 aa22.88■■□□□ 1.25
HOXB3-205ENST00000470495 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
HOXB3-205ENST00000470495 CUL7Q14999 1698 aa22.82■■□□□ 1.24
HOXB3-205ENST00000470495 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
HOXB3-205ENST00000470495 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
HOXB3-205ENST00000470495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.24
HOXB3-205ENST00000470495 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
HOXB3-205ENST00000470495 PPP1R15AO75807 674 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-205ENST00000470495 MYOM3Q5VTT5 1437 aa22.79■■□□□ 1.24
HOXB3-205ENST00000470495 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
HOXB3-205ENST00000470495 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
HOXB3-205ENST00000470495 ZNF644Q9H582 1327 aaPredicted RBP22.76■■□□□ 1.23
HOXB3-205ENST00000470495 TIMELESSQ9UNS1 1208 aa22.76■■□□□ 1.23
HOXB3-205ENST00000470495 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
HOXB3-205ENST00000470495 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
HOXB3-205ENST00000470495 KDM2AQ9Y2K7 1162 aa22.74■■□□□ 1.23
HOXB3-205ENST00000470495 SNAPC4Q5SXM2 1469 aa22.74■■□□□ 1.23
HOXB3-205ENST00000470495 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
HOXB3-205ENST00000470495 NBR1Q14596 966 aa22.71■■□□□ 1.23
HOXB3-205ENST00000470495 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
HOXB3-205ENST00000470495 SALL2Q9Y467 1007 aaPredicted RBP22.69■■□□□ 1.22
HOXB3-205ENST00000470495 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
HOXB3-205ENST00000470495 CDK13Q14004 1512 aaKnown RBP22.64■■□□□ 1.22
HOXB3-205ENST00000470495 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
HOXB3-205ENST00000470495 DEKP35659 375 aaKnown RBP22.62■■□□□ 1.21
HOXB3-205ENST00000470495 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
HOXB3-205ENST00000470495 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
HOXB3-205ENST00000470495 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
HOXB3-205ENST00000470495 HSPA5P11021 654 aaKnown RBP22.58■■□□□ 1.21
HOXB3-205ENST00000470495 PKD2Q13563 968 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms