RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 SLC24A1O60721 1099 aa13□□□□□ -0.33
PABPC4-209ENST00000468476 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
PABPC4-209ENST00000468476 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
PABPC4-209ENST00000468476 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
PABPC4-209ENST00000468476 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
PABPC4-209ENST00000468476 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
PABPC4-209ENST00000468476 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
PABPC4-209ENST00000468476 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
PABPC4-209ENST00000468476 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
PABPC4-209ENST00000468476 BCANQ96GW7 911 aa12.94□□□□□ -0.34
PABPC4-209ENST00000468476 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
PABPC4-209ENST00000468476 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
PABPC4-209ENST00000468476 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
PABPC4-209ENST00000468476 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
PABPC4-209ENST00000468476 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.347e-8■■■■■ 30.3
PABPC4-209ENST00000468476 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
PABPC4-209ENST00000468476 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
PABPC4-209ENST00000468476 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
PABPC4-209ENST00000468476 MIER1Q8N108 512 aa12.88□□□□□ -0.35
PABPC4-209ENST00000468476 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
PABPC4-209ENST00000468476 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
PABPC4-209ENST00000468476 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
PABPC4-209ENST00000468476 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
PABPC4-209ENST00000468476 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
PABPC4-209ENST00000468476 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
PABPC4-209ENST00000468476 DNMBPQ6XZF7 1577 aa12.84□□□□□ -0.35
PABPC4-209ENST00000468476 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
PABPC4-209ENST00000468476 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
PABPC4-209ENST00000468476 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
PABPC4-209ENST00000468476 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
PABPC4-209ENST00000468476 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
PABPC4-209ENST00000468476 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
PABPC4-209ENST00000468476 UBE2Q2Q8WVN8 375 aa12.8□□□□□ -0.36
PABPC4-209ENST00000468476 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
PABPC4-209ENST00000468476 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
PABPC4-209ENST00000468476 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
PABPC4-209ENST00000468476 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
PABPC4-209ENST00000468476 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.36
PABPC4-209ENST00000468476 PHLDB1Q86UU1 1377 aa12.76□□□□□ -0.37
PABPC4-209ENST00000468476 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
PABPC4-209ENST00000468476 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
PABPC4-209ENST00000468476 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
PABPC4-209ENST00000468476 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
PABPC4-209ENST00000468476 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
PABPC4-209ENST00000468476 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
PABPC4-209ENST00000468476 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
PABPC4-209ENST00000468476 PKNOX2Q96KN3 472 aa12.69□□□□□ -0.38
PABPC4-209ENST00000468476 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
PABPC4-209ENST00000468476 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
PABPC4-209ENST00000468476 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
PABPC4-209ENST00000468476 FOXD1Q16676 465 aa12.66□□□□□ -0.38
PABPC4-209ENST00000468476 PCF11O94913 1555 aaKnown RBP12.66□□□□□ -0.38
PABPC4-209ENST00000468476 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
PABPC4-209ENST00000468476 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
PABPC4-209ENST00000468476 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
PABPC4-209ENST00000468476 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
PABPC4-209ENST00000468476 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
PABPC4-209ENST00000468476 NBR1Q14596 966 aa12.64□□□□□ -0.39
PABPC4-209ENST00000468476 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
PABPC4-209ENST00000468476 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
PABPC4-209ENST00000468476 MSH5O43196 834 aa12.63□□□□□ -0.39
PABPC4-209ENST00000468476 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
PABPC4-209ENST00000468476 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
PABPC4-209ENST00000468476 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
PABPC4-209ENST00000468476 FKBP8Q14318 412 aa12.62□□□□□ -0.39
PABPC4-209ENST00000468476 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
PABPC4-209ENST00000468476 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
PABPC4-209ENST00000468476 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
PABPC4-209ENST00000468476 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
PABPC4-209ENST00000468476 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
PABPC4-209ENST00000468476 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
PABPC4-209ENST00000468476 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
PABPC4-209ENST00000468476 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
PABPC4-209ENST00000468476 CUL7Q14999 1698 aa12.57□□□□□ -0.4
PABPC4-209ENST00000468476 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
PABPC4-209ENST00000468476 NEFLP07196 543 aa12.56□□□□□ -0.4
PABPC4-209ENST00000468476 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
PABPC4-209ENST00000468476 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
PABPC4-209ENST00000468476 CDK13Q14004 1512 aaKnown RBP12.56□□□□□ -0.4
PABPC4-209ENST00000468476 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
PABPC4-209ENST00000468476 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
PABPC4-209ENST00000468476 ERICH6BQ5W0A0 696 aa12.55□□□□□ -0.4
PABPC4-209ENST00000468476 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
PABPC4-209ENST00000468476 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
PABPC4-209ENST00000468476 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.4
PABPC4-209ENST00000468476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.43e-6■■□□□ 12.4
PABPC4-209ENST00000468476 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
PABPC4-209ENST00000468476 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
PABPC4-209ENST00000468476 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
PABPC4-209ENST00000468476 IQGAP2Q13576 1575 aa12.5□□□□□ -0.41
PABPC4-209ENST00000468476 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
PABPC4-209ENST00000468476 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
PABPC4-209ENST00000468476 RTL5Q5HYW3 569 aaPredicted RBP12.48□□□□□ -0.41
PABPC4-209ENST00000468476 HNRNPMP52272 730 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 10.4
PABPC4-209ENST00000468476 CARMIL2Q6F5E8 1435 aa12.47□□□□□ -0.41
PABPC4-209ENST00000468476 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-209ENST00000468476 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
PABPC4-209ENST00000468476 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
PABPC4-209ENST00000468476 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
PABPC4-209ENST00000468476 TSPY4P0CV99 314 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms