RNA–Protein interactions for RNA: ENST00000468428.1

RRBP1-207, Transcript of ribosome binding protein 1, humanhuman

TSL 2

Gene RRBP1, Length 2,200 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRBP1-207ENST00000468428 CUL7Q14999 1698 aa24.39■■□□□ 1.5
RRBP1-207ENST00000468428 MIER1Q8N108 512 aa24.38■■□□□ 1.49
RRBP1-207ENST00000468428 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
RRBP1-207ENST00000468428 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
RRBP1-207ENST00000468428 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
RRBP1-207ENST00000468428 PCF11O94913 1555 aaKnown RBP24.36■■□□□ 1.49
RRBP1-207ENST00000468428 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
RRBP1-207ENST00000468428 NESP48681 1621 aa24.32■■□□□ 1.48
RRBP1-207ENST00000468428 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
RRBP1-207ENST00000468428 AQRO60306 1485 aaKnown RBP eCLIP24.3■■□□□ 1.481e-12■■■■■ 28.9
RRBP1-207ENST00000468428 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
RRBP1-207ENST00000468428 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
RRBP1-207ENST00000468428 CTTNBP2Q8WZ74 1663 aa24.28■■□□□ 1.48
RRBP1-207ENST00000468428 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
RRBP1-207ENST00000468428 CASKIN1Q8WXD9 1431 aa24.26■■□□□ 1.47
RRBP1-207ENST00000468428 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
RRBP1-207ENST00000468428 ITGAEP38570 1179 aa24.25■■□□□ 1.47
RRBP1-207ENST00000468428 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
RRBP1-207ENST00000468428 YTHDC1Q96MU7 727 aaKnown RBP24.23■■□□□ 1.47
RRBP1-207ENST00000468428 MAPKBP1O60336 1514 aa24.23■■□□□ 1.47
RRBP1-207ENST00000468428 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
RRBP1-207ENST00000468428 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
RRBP1-207ENST00000468428 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
RRBP1-207ENST00000468428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
RRBP1-207ENST00000468428 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
RRBP1-207ENST00000468428 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
RRBP1-207ENST00000468428 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
RRBP1-207ENST00000468428 FAM50AQ14320 339 aaKnown RBP24.12■■□□□ 1.45
RRBP1-207ENST00000468428 SAMD9Q5K651 1589 aa24.11■■□□□ 1.45
RRBP1-207ENST00000468428 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
RRBP1-207ENST00000468428 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
RRBP1-207ENST00000468428 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
RRBP1-207ENST00000468428 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
RRBP1-207ENST00000468428 FGD6Q6ZV73 1430 aa24.03■■□□□ 1.44
RRBP1-207ENST00000468428 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
RRBP1-207ENST00000468428 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
RRBP1-207ENST00000468428 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
RRBP1-207ENST00000468428 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
RRBP1-207ENST00000468428 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
RRBP1-207ENST00000468428 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
RRBP1-207ENST00000468428 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
RRBP1-207ENST00000468428 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
RRBP1-207ENST00000468428 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
RRBP1-207ENST00000468428 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.42
RRBP1-207ENST00000468428 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
RRBP1-207ENST00000468428 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
RRBP1-207ENST00000468428 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
RRBP1-207ENST00000468428 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
RRBP1-207ENST00000468428 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
RRBP1-207ENST00000468428 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
RRBP1-207ENST00000468428 UACAQ9BZF9 1416 aa23.83■■□□□ 1.4
RRBP1-207ENST00000468428 UGGT2Q9NYU1 1516 aa23.83■■□□□ 1.4
RRBP1-207ENST00000468428 PTPRKQ15262 1439 aa23.82■■□□□ 1.4
RRBP1-207ENST00000468428 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
RRBP1-207ENST00000468428 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
RRBP1-207ENST00000468428 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
RRBP1-207ENST00000468428 IQGAP2Q13576 1575 aa23.79■■□□□ 1.4
RRBP1-207ENST00000468428 NAIPQ13075 1403 aa23.77■■□□□ 1.4
RRBP1-207ENST00000468428 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
RRBP1-207ENST00000468428 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
RRBP1-207ENST00000468428 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
RRBP1-207ENST00000468428 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
RRBP1-207ENST00000468428 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
RRBP1-207ENST00000468428 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
RRBP1-207ENST00000468428 AKNAQ7Z591 1439 aa23.68■■□□□ 1.38
RRBP1-207ENST00000468428 WDR62O43379 1518 aa23.67■■□□□ 1.38
RRBP1-207ENST00000468428 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
RRBP1-207ENST00000468428 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.38
RRBP1-207ENST00000468428 MIA2Q96PC5 1412 aa23.64■■□□□ 1.38
RRBP1-207ENST00000468428 IFT140Q96RY7 1462 aa23.64■■□□□ 1.37
RRBP1-207ENST00000468428 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
RRBP1-207ENST00000468428 SUPT16HQ9Y5B9 1047 aaKnown RBP23.58■■□□□ 1.37
RRBP1-207ENST00000468428 KDM5BQ9UGL1 1544 aa23.57■■□□□ 1.36
RRBP1-207ENST00000468428 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
RRBP1-207ENST00000468428 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
RRBP1-207ENST00000468428 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
RRBP1-207ENST00000468428 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
RRBP1-207ENST00000468428 CCER2I3L3R5 266 aa23.53■■□□□ 1.36
RRBP1-207ENST00000468428 RRP7BPQ9NSQ0 103 aa23.51■■□□□ 1.35
RRBP1-207ENST00000468428 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
RRBP1-207ENST00000468428 DENND4BO75064 1496 aaPredicted RBP23.49■■□□□ 1.35
RRBP1-207ENST00000468428 ANP32CO43423 234 aa23.48■■□□□ 1.35
RRBP1-207ENST00000468428 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
RRBP1-207ENST00000468428 GRIN2AQ12879 1464 aa23.47■■□□□ 1.35
RRBP1-207ENST00000468428 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
RRBP1-207ENST00000468428 KDM6BO15054 1643 aa23.46■■□□□ 1.35
RRBP1-207ENST00000468428 ROCK1Q13464 1354 aa23.45■■□□□ 1.35
RRBP1-207ENST00000468428 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.34
RRBP1-207ENST00000468428 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
RRBP1-207ENST00000468428 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
RRBP1-207ENST00000468428 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
RRBP1-207ENST00000468428 DAPK1P53355 1430 aa23.42■■□□□ 1.34
RRBP1-207ENST00000468428 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
RRBP1-207ENST00000468428 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
RRBP1-207ENST00000468428 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
RRBP1-207ENST00000468428 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
RRBP1-207ENST00000468428 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
RRBP1-207ENST00000468428 ABCC5O15440 1437 aa23.36■■□□□ 1.33
RRBP1-207ENST00000468428 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
RRBP1-207ENST00000468428 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms