RNA–Protein interactions for RNA: ENST00000467439.1

RPSAP39-201, Transcript of ribosomal protein SA pseudogene 39, humanhuman

BASIC

Gene RPSAP39, Length 883 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP39-201ENST00000467439 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
RPSAP39-201ENST00000467439 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
RPSAP39-201ENST00000467439 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
RPSAP39-201ENST00000467439 WDR62O43379 1518 aa11.25□□□□□ -0.61
RPSAP39-201ENST00000467439 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
RPSAP39-201ENST00000467439 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
RPSAP39-201ENST00000467439 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
RPSAP39-201ENST00000467439 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
RPSAP39-201ENST00000467439 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
RPSAP39-201ENST00000467439 RGL2O15211 777 aa11.14□□□□□ -0.63
RPSAP39-201ENST00000467439 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
RPSAP39-201ENST00000467439 WIZO95785 1651 aa11.14□□□□□ -0.63
RPSAP39-201ENST00000467439 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
RPSAP39-201ENST00000467439 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
RPSAP39-201ENST00000467439 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
RPSAP39-201ENST00000467439 CAPN15O75808 1086 aa11.11□□□□□ -0.63
RPSAP39-201ENST00000467439 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
RPSAP39-201ENST00000467439 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
RPSAP39-201ENST00000467439 CFTRP13569 1480 aa11.06□□□□□ -0.64
RPSAP39-201ENST00000467439 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
RPSAP39-201ENST00000467439 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
RPSAP39-201ENST00000467439 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
RPSAP39-201ENST00000467439 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
RPSAP39-201ENST00000467439 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
RPSAP39-201ENST00000467439 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
RPSAP39-201ENST00000467439 MIER1Q8N108 512 aa11□□□□□ -0.65
RPSAP39-201ENST00000467439 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
RPSAP39-201ENST00000467439 PRDM2Q13029 1718 aa10.99□□□□□ -0.65
RPSAP39-201ENST00000467439 ABCB7O75027 752 aa10.99□□□□□ -0.65
RPSAP39-201ENST00000467439 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
RPSAP39-201ENST00000467439 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
RPSAP39-201ENST00000467439 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
RPSAP39-201ENST00000467439 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
RPSAP39-201ENST00000467439 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
RPSAP39-201ENST00000467439 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
RPSAP39-201ENST00000467439 NBR1Q14596 966 aa10.93□□□□□ -0.66
RPSAP39-201ENST00000467439 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
RPSAP39-201ENST00000467439 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
RPSAP39-201ENST00000467439 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.66
RPSAP39-201ENST00000467439 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
RPSAP39-201ENST00000467439 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
RPSAP39-201ENST00000467439 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
RPSAP39-201ENST00000467439 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
RPSAP39-201ENST00000467439 CHD1O14646 1710 aa10.89□□□□□ -0.67
RPSAP39-201ENST00000467439 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
RPSAP39-201ENST00000467439 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
RPSAP39-201ENST00000467439 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
RPSAP39-201ENST00000467439 ARAP1Q96P48 1450 aa10.85□□□□□ -0.67
RPSAP39-201ENST00000467439 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
RPSAP39-201ENST00000467439 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
RPSAP39-201ENST00000467439 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
RPSAP39-201ENST00000467439 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
RPSAP39-201ENST00000467439 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
RPSAP39-201ENST00000467439 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPSAP39-201ENST00000467439 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
RPSAP39-201ENST00000467439 TIMELESSQ9UNS1 1208 aa10.81□□□□□ -0.68
RPSAP39-201ENST00000467439 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
RPSAP39-201ENST00000467439 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
RPSAP39-201ENST00000467439 POLA1P09884 1462 aaPredicted RBP10.75□□□□□ -0.69
RPSAP39-201ENST00000467439 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
RPSAP39-201ENST00000467439 DSG3P32926 999 aa10.74□□□□□ -0.69
RPSAP39-201ENST00000467439 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
RPSAP39-201ENST00000467439 CLASP1Q7Z460 1538 aa10.73□□□□□ -0.69
RPSAP39-201ENST00000467439 SYNJ1O43426 1573 aa10.71□□□□□ -0.69
RPSAP39-201ENST00000467439 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
RPSAP39-201ENST00000467439 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
RPSAP39-201ENST00000467439 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
RPSAP39-201ENST00000467439 SOGA1O94964 1423 aa10.7□□□□□ -0.7
RPSAP39-201ENST00000467439 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
RPSAP39-201ENST00000467439 GSE1Q14687 1217 aa10.7□□□□□ -0.7
RPSAP39-201ENST00000467439 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
RPSAP39-201ENST00000467439 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
RPSAP39-201ENST00000467439 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
RPSAP39-201ENST00000467439 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
RPSAP39-201ENST00000467439 FGD5Q6ZNL6 1462 aa10.66□□□□□ -0.7
RPSAP39-201ENST00000467439 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
RPSAP39-201ENST00000467439 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
RPSAP39-201ENST00000467439 NUBP1P53384 320 aa10.64□□□□□ -0.71
RPSAP39-201ENST00000467439 GAPVD1Q14C86 1478 aa10.62□□□□□ -0.71
RPSAP39-201ENST00000467439 PBRM1Q86U86 1689 aa10.62□□□□□ -0.71
RPSAP39-201ENST00000467439 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
RPSAP39-201ENST00000467439 CUX1P39880 1505 aa10.6□□□□□ -0.71
RPSAP39-201ENST00000467439 STK25O00506 426 aa10.6□□□□□ -0.71
RPSAP39-201ENST00000467439 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
RPSAP39-201ENST00000467439 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
RPSAP39-201ENST00000467439 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
RPSAP39-201ENST00000467439 ARXQ96QS3 562 aa10.56□□□□□ -0.72
RPSAP39-201ENST00000467439 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
RPSAP39-201ENST00000467439 ERCC6L2Q5T890 1561 aa10.53□□□□□ -0.72
RPSAP39-201ENST00000467439 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.73
RPSAP39-201ENST00000467439 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
RPSAP39-201ENST00000467439 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
RPSAP39-201ENST00000467439 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
RPSAP39-201ENST00000467439 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
RPSAP39-201ENST00000467439 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
RPSAP39-201ENST00000467439 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
RPSAP39-201ENST00000467439 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
RPSAP39-201ENST00000467439 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
RPSAP39-201ENST00000467439 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
RPSAP39-201ENST00000467439 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms