RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
APOBEC1-202ENST00000467171 PRXQ9BXM0 1461 aa15.2■□□□□ 0.02
APOBEC1-202ENST00000467171 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
APOBEC1-202ENST00000467171 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
APOBEC1-202ENST00000467171 CUX2O14529 1486 aa15.16■□□□□ 0.02
APOBEC1-202ENST00000467171 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
APOBEC1-202ENST00000467171 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
APOBEC1-202ENST00000467171 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
APOBEC1-202ENST00000467171 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
APOBEC1-202ENST00000467171 IGF1RP08069 1367 aa15.14■□□□□ 0.01
APOBEC1-202ENST00000467171 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
APOBEC1-202ENST00000467171 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
APOBEC1-202ENST00000467171 POLA2Q14181 598 aa15.12■□□□□ 0.01
APOBEC1-202ENST00000467171 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
APOBEC1-202ENST00000467171 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0.01
APOBEC1-202ENST00000467171 ZBTB22O15209 634 aa15.05■□□□□ -0
APOBEC1-202ENST00000467171 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
APOBEC1-202ENST00000467171 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
APOBEC1-202ENST00000467171 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
APOBEC1-202ENST00000467171 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
APOBEC1-202ENST00000467171 CLIP1P30622 1438 aa15.01□□□□□ -0.01
APOBEC1-202ENST00000467171 WDR62O43379 1518 aa15.01□□□□□ -0.01
APOBEC1-202ENST00000467171 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
APOBEC1-202ENST00000467171 ERCC6Q03468 1493 aa14.96□□□□□ -0.01
APOBEC1-202ENST00000467171 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
APOBEC1-202ENST00000467171 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
APOBEC1-202ENST00000467171 TARBP1Q13395 1621 aaKnown RBP14.95□□□□□ -0.02
APOBEC1-202ENST00000467171 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
APOBEC1-202ENST00000467171 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
APOBEC1-202ENST00000467171 POTEHQ6S545 545 aa14.95□□□□□ -0.02
APOBEC1-202ENST00000467171 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
APOBEC1-202ENST00000467171 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
APOBEC1-202ENST00000467171 CUL7Q14999 1698 aa14.91□□□□□ -0.02
APOBEC1-202ENST00000467171 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
APOBEC1-202ENST00000467171 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
APOBEC1-202ENST00000467171 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
APOBEC1-202ENST00000467171 THOC2Q8NI27 1593 aaKnown RBP14.87□□□□□ -0.03
APOBEC1-202ENST00000467171 GRIN2BQ13224 1484 aa14.85□□□□□ -0.03
APOBEC1-202ENST00000467171 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
APOBEC1-202ENST00000467171 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
APOBEC1-202ENST00000467171 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
APOBEC1-202ENST00000467171 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
APOBEC1-202ENST00000467171 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
APOBEC1-202ENST00000467171 RANGAP1P46060 587 aaPredicted RBP14.78□□□□□ -0.04
APOBEC1-202ENST00000467171 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
APOBEC1-202ENST00000467171 EFCAB5A4FU69 1503 aa14.75□□□□□ -0.05
APOBEC1-202ENST00000467171 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
APOBEC1-202ENST00000467171 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
APOBEC1-202ENST00000467171 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
APOBEC1-202ENST00000467171 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
APOBEC1-202ENST00000467171 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
APOBEC1-202ENST00000467171 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
APOBEC1-202ENST00000467171 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
APOBEC1-202ENST00000467171 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
APOBEC1-202ENST00000467171 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
APOBEC1-202ENST00000467171 GRIN2AQ12879 1464 aa14.65□□□□□ -0.06
APOBEC1-202ENST00000467171 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
APOBEC1-202ENST00000467171 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
APOBEC1-202ENST00000467171 KIAA0586Q9BVV6 1533 aa14.64□□□□□ -0.07
APOBEC1-202ENST00000467171 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
APOBEC1-202ENST00000467171 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
APOBEC1-202ENST00000467171 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
APOBEC1-202ENST00000467171 HRCP23327 699 aa14.62□□□□□ -0.07
APOBEC1-202ENST00000467171 CASKIN1Q8WXD9 1431 aa14.62□□□□□ -0.07
APOBEC1-202ENST00000467171 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
APOBEC1-202ENST00000467171 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
APOBEC1-202ENST00000467171 FYCO1Q9BQS8 1478 aa14.6□□□□□ -0.07
APOBEC1-202ENST00000467171 UGGT2Q9NYU1 1516 aa14.6□□□□□ -0.07
APOBEC1-202ENST00000467171 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
APOBEC1-202ENST00000467171 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
APOBEC1-202ENST00000467171 NUP160Q12769 1436 aa14.58□□□□□ -0.07
APOBEC1-202ENST00000467171 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
APOBEC1-202ENST00000467171 TIAM1Q13009 1591 aa14.55□□□□□ -0.08
APOBEC1-202ENST00000467171 FBLN2P98095 1184 aa14.53□□□□□ -0.08
APOBEC1-202ENST00000467171 PCF11O94913 1555 aaKnown RBP14.52□□□□□ -0.08
APOBEC1-202ENST00000467171 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
APOBEC1-202ENST00000467171 RRBP1Q9P2E9 1410 aaKnown RBP14.5□□□□□ -0.09
APOBEC1-202ENST00000467171 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
APOBEC1-202ENST00000467171 DISP1Q96F81 1524 aa14.5□□□□□ -0.09
APOBEC1-202ENST00000467171 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
APOBEC1-202ENST00000467171 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
APOBEC1-202ENST00000467171 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
APOBEC1-202ENST00000467171 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
APOBEC1-202ENST00000467171 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
APOBEC1-202ENST00000467171 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
APOBEC1-202ENST00000467171 CARMIL2Q6F5E8 1435 aa14.44□□□□□ -0.1
APOBEC1-202ENST00000467171 ATP1B4Q9UN42 357 aaPredicted RBP14.44□□□□□ -0.1
APOBEC1-202ENST00000467171 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
APOBEC1-202ENST00000467171 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
APOBEC1-202ENST00000467171 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
APOBEC1-202ENST00000467171 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
APOBEC1-202ENST00000467171 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
APOBEC1-202ENST00000467171 PHLDB1Q86UU1 1377 aa14.39□□□□□ -0.11
APOBEC1-202ENST00000467171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.39□□□□□ -0.11
APOBEC1-202ENST00000467171 HECW1Q76N89 1606 aa14.39□□□□□ -0.11
APOBEC1-202ENST00000467171 EPRSP07814 1512 aaKnown RBP14.38□□□□□ -0.11
APOBEC1-202ENST00000467171 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
APOBEC1-202ENST00000467171 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
APOBEC1-202ENST00000467171 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.11
APOBEC1-202ENST00000467171 NUP153P49790 1475 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms