RNA–Protein interactions for RNA: ENST00000467160.1

ATP13A1-204, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,431 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-204ENST00000467160 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
ATP13A1-204ENST00000467160 ZNF316A6NFI3 1004 aaPredicted RBP26.91■■□□□ 1.9
ATP13A1-204ENST00000467160 WDR97A6NE52 1622 aa26.91■■□□□ 1.9
ATP13A1-204ENST00000467160 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
ATP13A1-204ENST00000467160 FHAD1B1AJZ9 1412 aa26.89■■□□□ 1.9
ATP13A1-204ENST00000467160 WDR62O43379 1518 aa26.85■■□□□ 1.89
ATP13A1-204ENST00000467160 DHX57Q6P158 1386 aaKnown RBP26.84■■□□□ 1.89
ATP13A1-204ENST00000467160 FHOD3Q2V2M9 1422 aa26.84■■□□□ 1.89
ATP13A1-204ENST00000467160 LRRC9Q6ZRR7 1453 aa26.84■■□□□ 1.89
ATP13A1-204ENST00000467160 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
ATP13A1-204ENST00000467160 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
ATP13A1-204ENST00000467160 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
ATP13A1-204ENST00000467160 CTTNBP2Q8WZ74 1663 aa26.82■■□□□ 1.88
ATP13A1-204ENST00000467160 ITGAEP38570 1179 aa26.81■■□□□ 1.88
ATP13A1-204ENST00000467160 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
ATP13A1-204ENST00000467160 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
ATP13A1-204ENST00000467160 EFCAB5A4FU69 1503 aa26.79■■□□□ 1.88
ATP13A1-204ENST00000467160 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
ATP13A1-204ENST00000467160 CFAP43Q8NDM7 1665 aa26.74■■□□□ 1.87
ATP13A1-204ENST00000467160 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
ATP13A1-204ENST00000467160 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
ATP13A1-204ENST00000467160 CASKIN1Q8WXD9 1431 aa26.71■■□□□ 1.87
ATP13A1-204ENST00000467160 FYCO1Q9BQS8 1478 aa26.7■■□□□ 1.86
ATP13A1-204ENST00000467160 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.863e-8■■■■□ 24.9
ATP13A1-204ENST00000467160 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
ATP13A1-204ENST00000467160 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
ATP13A1-204ENST00000467160 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
ATP13A1-204ENST00000467160 FAM50AQ14320 339 aaKnown RBP26.63■■□□□ 1.85
ATP13A1-204ENST00000467160 RAB3GAP2Q9H2M9 1393 aa26.6■■□□□ 1.85
ATP13A1-204ENST00000467160 SAMD9Q5K651 1589 aa26.59■■□□□ 1.85
ATP13A1-204ENST00000467160 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
ATP13A1-204ENST00000467160 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
ATP13A1-204ENST00000467160 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
ATP13A1-204ENST00000467160 PBRM1Q86U86 1689 aa26.53■■□□□ 1.84
ATP13A1-204ENST00000467160 ACIN1Q9UKV3 1341 aaKnown RBP26.49■■□□□ 1.83
ATP13A1-204ENST00000467160 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
ATP13A1-204ENST00000467160 LRRIQ1Q96JM4 1722 aa26.46■■□□□ 1.83
ATP13A1-204ENST00000467160 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
ATP13A1-204ENST00000467160 MIER1Q8N108 512 aa26.46■■□□□ 1.83
ATP13A1-204ENST00000467160 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
ATP13A1-204ENST00000467160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.44■■□□□ 1.82
ATP13A1-204ENST00000467160 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
ATP13A1-204ENST00000467160 MAPKBP1O60336 1514 aa26.42■■□□□ 1.82
ATP13A1-204ENST00000467160 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
ATP13A1-204ENST00000467160 CENPBP07199 599 aaPredicted RBP26.41■■□□□ 1.82
ATP13A1-204ENST00000467160 FGD6Q6ZV73 1430 aa26.4■■□□□ 1.82
ATP13A1-204ENST00000467160 IQGAP2Q13576 1575 aa26.36■■□□□ 1.81
ATP13A1-204ENST00000467160 FBLN2P98095 1184 aa26.34■■□□□ 1.81
ATP13A1-204ENST00000467160 NCOA2Q15596 1464 aa26.33■■□□□ 1.81
ATP13A1-204ENST00000467160 MYT1Q01538 1121 aa26.3■■□□□ 1.8
ATP13A1-204ENST00000467160 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
ATP13A1-204ENST00000467160 EHBP1L1Q8N3D4 1523 aa26.27■■□□□ 1.8
ATP13A1-204ENST00000467160 MYOM3Q5VTT5 1437 aa26.27■■□□□ 1.8
ATP13A1-204ENST00000467160 SIN3AQ96ST3 1273 aa26.27■■□□□ 1.8
ATP13A1-204ENST00000467160 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
ATP13A1-204ENST00000467160 YTHDC1Q96MU7 727 aaKnown RBP26.26■■□□□ 1.79
ATP13A1-204ENST00000467160 MAGI3Q5TCQ9 1506 aa26.26■■□□□ 1.79
ATP13A1-204ENST00000467160 CCDC18Q5T9S5 1454 aa26.25■■□□□ 1.79
ATP13A1-204ENST00000467160 PTPRKQ15262 1439 aa26.25■■□□□ 1.79
ATP13A1-204ENST00000467160 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
ATP13A1-204ENST00000467160 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
ATP13A1-204ENST00000467160 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
ATP13A1-204ENST00000467160 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
ATP13A1-204ENST00000467160 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
ATP13A1-204ENST00000467160 KIAA0586Q9BVV6 1533 aa26.17■■□□□ 1.78
ATP13A1-204ENST00000467160 HFM1A2PYH4 1435 aa26.16■■□□□ 1.78
ATP13A1-204ENST00000467160 PTPN23Q9H3S7 1636 aa26.16■■□□□ 1.78
ATP13A1-204ENST00000467160 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
ATP13A1-204ENST00000467160 GTF3C3Q9Y5Q9 886 aa26.16■■□□□ 1.78
ATP13A1-204ENST00000467160 CDK13Q14004 1512 aaKnown RBP26.14■■□□□ 1.77
ATP13A1-204ENST00000467160 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
ATP13A1-204ENST00000467160 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
ATP13A1-204ENST00000467160 TIMELESSQ9UNS1 1208 aa26.11■■□□□ 1.77
ATP13A1-204ENST00000467160 NAIPQ13075 1403 aa26.1■■□□□ 1.77
ATP13A1-204ENST00000467160 DISP1Q96F81 1524 aa26.1■■□□□ 1.77
ATP13A1-204ENST00000467160 KIAA0556O60303 1618 aa26.08■■□□□ 1.77
ATP13A1-204ENST00000467160 UACAQ9BZF9 1416 aa26.07■■□□□ 1.76
ATP13A1-204ENST00000467160 TCOF1Q13428 1488 aaKnown RBP26.06■■□□□ 1.76
ATP13A1-204ENST00000467160 CHIC2Q9UKJ5 165 aa26.03■■□□□ 1.76
ATP13A1-204ENST00000467160 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
ATP13A1-204ENST00000467160 RRP7BPQ9NSQ0 103 aa26.02■■□□□ 1.76
ATP13A1-204ENST00000467160 MIA2Q96PC5 1412 aa26■■□□□ 1.75
ATP13A1-204ENST00000467160 NUP153P49790 1475 aaKnown RBP25.97■■□□□ 1.75
ATP13A1-204ENST00000467160 RAPGEF6Q8TEU7 1601 aa25.96■■□□□ 1.75
ATP13A1-204ENST00000467160 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
ATP13A1-204ENST00000467160 TONSLQ96HA7 1378 aa25.92■■□□□ 1.74
ATP13A1-204ENST00000467160 CHD1O14646 1710 aa25.92■■□□□ 1.74
ATP13A1-204ENST00000467160 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
ATP13A1-204ENST00000467160 NUP160Q12769 1436 aa25.89■■□□□ 1.74
ATP13A1-204ENST00000467160 GCC2Q8IWJ2 1684 aa25.89■■□□□ 1.74
ATP13A1-204ENST00000467160 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
ATP13A1-204ENST00000467160 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
ATP13A1-204ENST00000467160 TRIM52Q96A61 297 aa25.86■■□□□ 1.73
ATP13A1-204ENST00000467160 HIRIP3Q9BW71 556 aaPredicted RBP25.86■■□□□ 1.73
ATP13A1-204ENST00000467160 KDM6BO15054 1643 aa25.85■■□□□ 1.73
ATP13A1-204ENST00000467160 PLB1Q6P1J6 1458 aa25.84■■□□□ 1.73
ATP13A1-204ENST00000467160 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
ATP13A1-204ENST00000467160 ZNF644Q9H582 1327 aaPredicted RBP25.83■■□□□ 1.73
ATP13A1-204ENST00000467160 CARMIL2Q6F5E8 1435 aa25.81■■□□□ 1.72
ATP13A1-204ENST00000467160 PRG4Q92954 1404 aaPredicted RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms