RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
RRP1-201ENST00000467112 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
RRP1-201ENST00000467112 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
RRP1-201ENST00000467112 MAP3K1Q13233 1512 aa21.39■■□□□ 1.01
RRP1-201ENST00000467112 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
RRP1-201ENST00000467112 TSHZ2Q9NRE2 1034 aa21.37■■□□□ 1.01
RRP1-201ENST00000467112 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
RRP1-201ENST00000467112 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
RRP1-201ENST00000467112 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
RRP1-201ENST00000467112 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1
RRP1-201ENST00000467112 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
RRP1-201ENST00000467112 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
RRP1-201ENST00000467112 BCANQ96GW7 911 aa21.29■■□□□ 1
RRP1-201ENST00000467112 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
RRP1-201ENST00000467112 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
RRP1-201ENST00000467112 PCF11O94913 1555 aaKnown RBP21.26■□□□□ 0.99
RRP1-201ENST00000467112 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
RRP1-201ENST00000467112 FKBP8Q14318 412 aa21.23■□□□□ 0.99
RRP1-201ENST00000467112 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
RRP1-201ENST00000467112 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
RRP1-201ENST00000467112 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
RRP1-201ENST00000467112 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
RRP1-201ENST00000467112 ANP32CO43423 234 aa21.12■□□□□ 0.97
RRP1-201ENST00000467112 FYCO1Q9BQS8 1478 aa21.12■□□□□ 0.97
RRP1-201ENST00000467112 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
RRP1-201ENST00000467112 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
RRP1-201ENST00000467112 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
RRP1-201ENST00000467112 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
RRP1-201ENST00000467112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.975e-6■□□□□ 10.9
RRP1-201ENST00000467112 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
RRP1-201ENST00000467112 ANP32EQ9BTT0 268 aa21.07■□□□□ 0.96
RRP1-201ENST00000467112 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
RRP1-201ENST00000467112 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
RRP1-201ENST00000467112 NEFLP07196 543 aa21.06■□□□□ 0.96
RRP1-201ENST00000467112 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
RRP1-201ENST00000467112 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.964e-7■■■■■ 36.5
RRP1-201ENST00000467112 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
RRP1-201ENST00000467112 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
RRP1-201ENST00000467112 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
RRP1-201ENST00000467112 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
RRP1-201ENST00000467112 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
RRP1-201ENST00000467112 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
RRP1-201ENST00000467112 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
RRP1-201ENST00000467112 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
RRP1-201ENST00000467112 NESP48681 1621 aa20.98■□□□□ 0.95
RRP1-201ENST00000467112 HFM1A2PYH4 1435 aa20.98■□□□□ 0.95
RRP1-201ENST00000467112 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
RRP1-201ENST00000467112 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
RRP1-201ENST00000467112 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
RRP1-201ENST00000467112 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
RRP1-201ENST00000467112 CTTNBP2Q8WZ74 1663 aa20.94■□□□□ 0.94
RRP1-201ENST00000467112 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
RRP1-201ENST00000467112 RBM19Q9Y4C8 960 aaKnown RBP20.94■□□□□ 0.94
RRP1-201ENST00000467112 CUL7Q14999 1698 aa20.93■□□□□ 0.94
RRP1-201ENST00000467112 NAIPQ13075 1403 aa20.92■□□□□ 0.94
RRP1-201ENST00000467112 NCOA2Q15596 1464 aa20.89■□□□□ 0.94
RRP1-201ENST00000467112 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
RRP1-201ENST00000467112 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
RRP1-201ENST00000467112 KDM5BQ9UGL1 1544 aa20.85■□□□□ 0.93
RRP1-201ENST00000467112 LRRIQ1Q96JM4 1722 aa20.85■□□□□ 0.93
RRP1-201ENST00000467112 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
RRP1-201ENST00000467112 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
RRP1-201ENST00000467112 CHIC2Q9UKJ5 165 aa20.83■□□□□ 0.93
RRP1-201ENST00000467112 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
RRP1-201ENST00000467112 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
RRP1-201ENST00000467112 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
RRP1-201ENST00000467112 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
RRP1-201ENST00000467112 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
RRP1-201ENST00000467112 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
RRP1-201ENST00000467112 SUPT6HQ7KZ85 1726 aaKnown RBP20.78■□□□□ 0.92
RRP1-201ENST00000467112 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
RRP1-201ENST00000467112 WDR62O43379 1518 aa20.78■□□□□ 0.92
RRP1-201ENST00000467112 EHBP1L1Q8N3D4 1523 aa20.76■□□□□ 0.91
RRP1-201ENST00000467112 MAGI3Q5TCQ9 1506 aa20.75■□□□□ 0.91
RRP1-201ENST00000467112 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
RRP1-201ENST00000467112 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
RRP1-201ENST00000467112 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
RRP1-201ENST00000467112 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
RRP1-201ENST00000467112 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
RRP1-201ENST00000467112 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
RRP1-201ENST00000467112 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
RRP1-201ENST00000467112 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
RRP1-201ENST00000467112 FOXD1Q16676 465 aa20.69■□□□□ 0.9
RRP1-201ENST00000467112 MSH5O43196 834 aa20.68■□□□□ 0.9
RRP1-201ENST00000467112 KDM6BO15054 1643 aa20.68■□□□□ 0.9
RRP1-201ENST00000467112 L3MBTL2Q969R5 705 aa20.67■□□□□ 0.9
RRP1-201ENST00000467112 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
RRP1-201ENST00000467112 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
RRP1-201ENST00000467112 TCOF1Q13428 1488 aaKnown RBP20.66■□□□□ 0.9
RRP1-201ENST00000467112 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
RRP1-201ENST00000467112 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
RRP1-201ENST00000467112 HECW1Q76N89 1606 aa20.65■□□□□ 0.9
RRP1-201ENST00000467112 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.9
RRP1-201ENST00000467112 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.9
RRP1-201ENST00000467112 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
RRP1-201ENST00000467112 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
RRP1-201ENST00000467112 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
RRP1-201ENST00000467112 AKNAQ7Z591 1439 aa20.6■□□□□ 0.89
RRP1-201ENST00000467112 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
RRP1-201ENST00000467112 EPRSP07814 1512 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms