RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
UBXN4-205ENST00000467065 FBLN2P98095 1184 aa11.58□□□□□ -0.56
UBXN4-205ENST00000467065 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
UBXN4-205ENST00000467065 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
UBXN4-205ENST00000467065 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
UBXN4-205ENST00000467065 SYNJ2O15056 1496 aa11.54□□□□□ -0.56
UBXN4-205ENST00000467065 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
UBXN4-205ENST00000467065 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
UBXN4-205ENST00000467065 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
UBXN4-205ENST00000467065 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
UBXN4-205ENST00000467065 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
UBXN4-205ENST00000467065 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
UBXN4-205ENST00000467065 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
UBXN4-205ENST00000467065 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
UBXN4-205ENST00000467065 ERCC6L2Q5T890 1561 aa11.4□□□□□ -0.58
UBXN4-205ENST00000467065 SHROOM2Q13796 1616 aa11.39□□□□□ -0.59
UBXN4-205ENST00000467065 NUP160Q12769 1436 aa11.39□□□□□ -0.59
UBXN4-205ENST00000467065 CUL7Q14999 1698 aa11.37□□□□□ -0.59
UBXN4-205ENST00000467065 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
UBXN4-205ENST00000467065 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
UBXN4-205ENST00000467065 IGF1RP08069 1367 aa11.28□□□□□ -0.6
UBXN4-205ENST00000467065 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
UBXN4-205ENST00000467065 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
UBXN4-205ENST00000467065 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
UBXN4-205ENST00000467065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.612e-9■□□□□ 10.3
UBXN4-205ENST00000467065 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
UBXN4-205ENST00000467065 KIF13AQ9H1H9 1805 aa11.23□□□□□ -0.61
UBXN4-205ENST00000467065 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
UBXN4-205ENST00000467065 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
UBXN4-205ENST00000467065 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
UBXN4-205ENST00000467065 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
UBXN4-205ENST00000467065 IQGAP2Q13576 1575 aa11.2□□□□□ -0.62
UBXN4-205ENST00000467065 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
UBXN4-205ENST00000467065 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
UBXN4-205ENST00000467065 MAPKBP1O60336 1514 aa11.11□□□□□ -0.63
UBXN4-205ENST00000467065 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
UBXN4-205ENST00000467065 DIP2BQ9P265 1576 aa11.11□□□□□ -0.63
UBXN4-205ENST00000467065 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
UBXN4-205ENST00000467065 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
UBXN4-205ENST00000467065 UGGT2Q9NYU1 1516 aa11.1□□□□□ -0.63
UBXN4-205ENST00000467065 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
UBXN4-205ENST00000467065 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
UBXN4-205ENST00000467065 TNIKQ9UKE5 1360 aa11.08□□□□□ -0.64
UBXN4-205ENST00000467065 PTPRGP23470 1445 aa11.08□□□□□ -0.64
UBXN4-205ENST00000467065 ABCC10Q5T3U5 1492 aa11.06□□□□□ -0.64
UBXN4-205ENST00000467065 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
UBXN4-205ENST00000467065 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBXN4-205ENST00000467065 ZCCHC11Q5TAX3 1644 aaKnown RBP11.05□□□□□ -0.64
UBXN4-205ENST00000467065 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
UBXN4-205ENST00000467065 UHRF1BP1LA0JNW5 1464 aa11.02□□□□□ -0.65
UBXN4-205ENST00000467065 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
UBXN4-205ENST00000467065 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
UBXN4-205ENST00000467065 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
UBXN4-205ENST00000467065 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
UBXN4-205ENST00000467065 GOLGA3Q08378 1498 aa11□□□□□ -0.65
UBXN4-205ENST00000467065 ABCA8O94911 1581 aa10.99□□□□□ -0.65
UBXN4-205ENST00000467065 KDM6BO15054 1643 aa10.98□□□□□ -0.65
UBXN4-205ENST00000467065 ASXL2Q76L83 1435 aa10.98□□□□□ -0.65
UBXN4-205ENST00000467065 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
UBXN4-205ENST00000467065 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
UBXN4-205ENST00000467065 SAMD9Q5K651 1589 aa10.98□□□□□ -0.65
UBXN4-205ENST00000467065 DSG3P32926 999 aa10.97□□□□□ -0.65
UBXN4-205ENST00000467065 EEA1Q15075 1411 aa10.97□□□□□ -0.65
UBXN4-205ENST00000467065 GLI2P10070 1586 aa10.97□□□□□ -0.65
UBXN4-205ENST00000467065 KIF21BO75037 1637 aa10.96□□□□□ -0.65
UBXN4-205ENST00000467065 MAP3K4Q9Y6R4 1608 aa10.96□□□□□ -0.65
UBXN4-205ENST00000467065 POTEHQ6S545 545 aa10.96□□□□□ -0.65
UBXN4-205ENST00000467065 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
UBXN4-205ENST00000467065 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
UBXN4-205ENST00000467065 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-205ENST00000467065 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
UBXN4-205ENST00000467065 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
UBXN4-205ENST00000467065 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
UBXN4-205ENST00000467065 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
UBXN4-205ENST00000467065 CAPN15O75808 1086 aa10.9□□□□□ -0.66
UBXN4-205ENST00000467065 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
UBXN4-205ENST00000467065 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
UBXN4-205ENST00000467065 FHOD3Q2V2M9 1422 aa10.86□□□□□ -0.67
UBXN4-205ENST00000467065 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
UBXN4-205ENST00000467065 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
UBXN4-205ENST00000467065 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
UBXN4-205ENST00000467065 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
UBXN4-205ENST00000467065 ATP10BO94823 1461 aa10.84□□□□□ -0.67
UBXN4-205ENST00000467065 ABCA9Q8IUA7 1624 aa10.83□□□□□ -0.68
UBXN4-205ENST00000467065 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
UBXN4-205ENST00000467065 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
UBXN4-205ENST00000467065 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
UBXN4-205ENST00000467065 MAGI3Q5TCQ9 1506 aa10.8□□□□□ -0.68
UBXN4-205ENST00000467065 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
UBXN4-205ENST00000467065 LRRIQ1Q96JM4 1722 aa10.8□□□□□ -0.68
UBXN4-205ENST00000467065 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
UBXN4-205ENST00000467065 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
UBXN4-205ENST00000467065 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
UBXN4-205ENST00000467065 CDK13Q14004 1512 aaKnown RBP10.76□□□□□ -0.69
UBXN4-205ENST00000467065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
UBXN4-205ENST00000467065 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
UBXN4-205ENST00000467065 TTC37Q6PGP7 1564 aa10.75□□□□□ -0.69
UBXN4-205ENST00000467065 SLC4A2P04920 1241 aa10.74□□□□□ -0.69
UBXN4-205ENST00000467065 ADGRL1O94910 1474 aa10.73□□□□□ -0.69
UBXN4-205ENST00000467065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms