RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
SFXN3-204ENST00000466982 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
SFXN3-204ENST00000466982 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
SFXN3-204ENST00000466982 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
SFXN3-204ENST00000466982 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
SFXN3-204ENST00000466982 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
SFXN3-204ENST00000466982 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
SFXN3-204ENST00000466982 KIF21BO75037 1637 aa15.45■□□□□ 0.06
SFXN3-204ENST00000466982 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
SFXN3-204ENST00000466982 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
SFXN3-204ENST00000466982 PPP1R15AO75807 674 aaPredicted RBP15.43■□□□□ 0.06
SFXN3-204ENST00000466982 SIN3AQ96ST3 1273 aa15.39■□□□□ 0.05
SFXN3-204ENST00000466982 NBR1Q14596 966 aa15.37■□□□□ 0.05
SFXN3-204ENST00000466982 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
SFXN3-204ENST00000466982 ANP32CO43423 234 aa15.36■□□□□ 0.05
SFXN3-204ENST00000466982 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
SFXN3-204ENST00000466982 IL27Q8NEV9 243 aa15.35■□□□□ 0.05
SFXN3-204ENST00000466982 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
SFXN3-204ENST00000466982 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
SFXN3-204ENST00000466982 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
SFXN3-204ENST00000466982 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
SFXN3-204ENST00000466982 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
SFXN3-204ENST00000466982 NESP48681 1621 aa15.32■□□□□ 0.04
SFXN3-204ENST00000466982 CFTRP13569 1480 aa15.31■□□□□ 0.04
SFXN3-204ENST00000466982 CUX2O14529 1486 aa15.31■□□□□ 0.04
SFXN3-204ENST00000466982 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-204ENST00000466982 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
SFXN3-204ENST00000466982 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
SFXN3-204ENST00000466982 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
SFXN3-204ENST00000466982 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
SFXN3-204ENST00000466982 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SFXN3-204ENST00000466982 NOP58Q9Y2X3 529 aaKnown RBP15.24■□□□□ 0.03
SFXN3-204ENST00000466982 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
SFXN3-204ENST00000466982 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
SFXN3-204ENST00000466982 ZMYND15Q9H091 742 aa15.18■□□□□ 0.02
SFXN3-204ENST00000466982 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
SFXN3-204ENST00000466982 GLIPR1L2Q4G1C9 344 aa15.16■□□□□ 0.02
SFXN3-204ENST00000466982 SETD5Q9C0A6 1442 aa15.16■□□□□ 0.02
SFXN3-204ENST00000466982 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
SFXN3-204ENST00000466982 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
SFXN3-204ENST00000466982 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
SFXN3-204ENST00000466982 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
SFXN3-204ENST00000466982 PDE4CQ08493 712 aa15.08■□□□□ 0
SFXN3-204ENST00000466982 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
SFXN3-204ENST00000466982 ERCC6Q03468 1493 aa15.06■□□□□ 0
SFXN3-204ENST00000466982 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
SFXN3-204ENST00000466982 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
SFXN3-204ENST00000466982 PRXQ9BXM0 1461 aa15.06■□□□□ 0
SFXN3-204ENST00000466982 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
SFXN3-204ENST00000466982 FGD1P98174 961 aa15.05■□□□□ -0
SFXN3-204ENST00000466982 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
SFXN3-204ENST00000466982 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
SFXN3-204ENST00000466982 CUX1P39880 1505 aa15.04■□□□□ -0
SFXN3-204ENST00000466982 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
SFXN3-204ENST00000466982 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
SFXN3-204ENST00000466982 ZBTB47Q9UFB7 747 aaPredicted RBP15.02□□□□□ -0.01
SFXN3-204ENST00000466982 C11orf95C9JLR9 678 aaPredicted RBP15.02□□□□□ -0.01
SFXN3-204ENST00000466982 PDIA4P13667 645 aaKnown RBP15.01□□□□□ -0.01
SFXN3-204ENST00000466982 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
SFXN3-204ENST00000466982 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
SFXN3-204ENST00000466982 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
SFXN3-204ENST00000466982 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
SFXN3-204ENST00000466982 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
SFXN3-204ENST00000466982 WASHC2AQ641Q2 1341 aa14.98□□□□□ -0.01
SFXN3-204ENST00000466982 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
SFXN3-204ENST00000466982 A0A0U1RQG5 324 aaPredicted RBP14.98□□□□□ -0.01
SFXN3-204ENST00000466982 AAMPQ13685 434 aa14.97□□□□□ -0.01
SFXN3-204ENST00000466982 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
SFXN3-204ENST00000466982 LAS1LQ9Y4W2 734 aaKnown RBP14.95□□□□□ -0.02
SFXN3-204ENST00000466982 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
SFXN3-204ENST00000466982 BIVM-ERCC5R4GMW8 1640 aa14.94□□□□□ -0.02
SFXN3-204ENST00000466982 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
SFXN3-204ENST00000466982 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
SFXN3-204ENST00000466982 RBM10P98175 930 aaKnown RBP14.94□□□□□ -0.02
SFXN3-204ENST00000466982 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
SFXN3-204ENST00000466982 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
SFXN3-204ENST00000466982 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
SFXN3-204ENST00000466982 MRS2Q9HD23 443 aa14.92□□□□□ -0.02
SFXN3-204ENST00000466982 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
SFXN3-204ENST00000466982 TIAM1Q13009 1591 aa14.92□□□□□ -0.02
SFXN3-204ENST00000466982 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
SFXN3-204ENST00000466982 NEFMP07197 916 aa14.9□□□□□ -0.02
SFXN3-204ENST00000466982 ATP1B4Q9UN42 357 aaPredicted RBP14.9□□□□□ -0.02
SFXN3-204ENST00000466982 LRRC9Q6ZRR7 1453 aa14.9□□□□□ -0.02
SFXN3-204ENST00000466982 WASHC2CQ9Y4E1 1318 aa14.89□□□□□ -0.03
SFXN3-204ENST00000466982 PRKRIP1Q9H875 184 aaPredicted RBP14.88□□□□□ -0.03
SFXN3-204ENST00000466982 BRPF3Q9ULD4 1205 aa14.88□□□□□ -0.03
SFXN3-204ENST00000466982 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
SFXN3-204ENST00000466982 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
SFXN3-204ENST00000466982 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
SFXN3-204ENST00000466982 CNGB1Q14028 1251 aaPredicted RBP14.86□□□□□ -0.03
SFXN3-204ENST00000466982 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
SFXN3-204ENST00000466982 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
SFXN3-204ENST00000466982 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
SFXN3-204ENST00000466982 WDR62O43379 1518 aa14.84□□□□□ -0.03
SFXN3-204ENST00000466982 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.04
SFXN3-204ENST00000466982 CNTLNQ9NXG0 1405 aa14.82□□□□□ -0.04
SFXN3-204ENST00000466982 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
SFXN3-204ENST00000466982 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
SFXN3-204ENST00000466982 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms