RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
SRPRB-202ENST00000466636 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
SRPRB-202ENST00000466636 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
SRPRB-202ENST00000466636 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
SRPRB-202ENST00000466636 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
SRPRB-202ENST00000466636 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
SRPRB-202ENST00000466636 ARAP1Q96P48 1450 aa15.05■□□□□ -0
SRPRB-202ENST00000466636 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
SRPRB-202ENST00000466636 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
SRPRB-202ENST00000466636 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
SRPRB-202ENST00000466636 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
SRPRB-202ENST00000466636 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
SRPRB-202ENST00000466636 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
SRPRB-202ENST00000466636 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
SRPRB-202ENST00000466636 CTTNBP2Q8WZ74 1663 aa14.95□□□□□ -0.02
SRPRB-202ENST00000466636 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
SRPRB-202ENST00000466636 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
SRPRB-202ENST00000466636 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
SRPRB-202ENST00000466636 KIAA0586Q9BVV6 1533 aa14.9□□□□□ -0.02
SRPRB-202ENST00000466636 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
SRPRB-202ENST00000466636 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
SRPRB-202ENST00000466636 IQGAP2Q13576 1575 aa14.89□□□□□ -0.03
SRPRB-202ENST00000466636 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
SRPRB-202ENST00000466636 NUP160Q12769 1436 aa14.88□□□□□ -0.03
SRPRB-202ENST00000466636 FHOD3Q2V2M9 1422 aa14.88□□□□□ -0.03
SRPRB-202ENST00000466636 PCGF6Q9BYE7 350 aa14.87□□□□□ -0.03
SRPRB-202ENST00000466636 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
SRPRB-202ENST00000466636 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
SRPRB-202ENST00000466636 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
SRPRB-202ENST00000466636 FBLN2P98095 1184 aa14.82□□□□□ -0.04
SRPRB-202ENST00000466636 APLP2Q06481 763 aa14.81□□□□□ -0.04
SRPRB-202ENST00000466636 FMN1Q68DA7 1419 aa14.81□□□□□ -0.04
SRPRB-202ENST00000466636 CASKIN1Q8WXD9 1431 aa14.8□□□□□ -0.04
SRPRB-202ENST00000466636 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
SRPRB-202ENST00000466636 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
SRPRB-202ENST00000466636 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
SRPRB-202ENST00000466636 FYCO1Q9BQS8 1478 aa14.78□□□□□ -0.04
SRPRB-202ENST00000466636 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SRPRB-202ENST00000466636 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
SRPRB-202ENST00000466636 KANK4Q5T7N3 995 aaPredicted RBP14.75□□□□□ -0.05
SRPRB-202ENST00000466636 TIAM1Q13009 1591 aa14.74□□□□□ -0.05
SRPRB-202ENST00000466636 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
SRPRB-202ENST00000466636 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
SRPRB-202ENST00000466636 CHD1O14646 1710 aa14.71□□□□□ -0.05
SRPRB-202ENST00000466636 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
SRPRB-202ENST00000466636 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
SRPRB-202ENST00000466636 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
SRPRB-202ENST00000466636 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
SRPRB-202ENST00000466636 ATP1B4Q9UN42 357 aaPredicted RBP14.66□□□□□ -0.06
SRPRB-202ENST00000466636 CLASP1Q7Z460 1538 aa14.65□□□□□ -0.06
SRPRB-202ENST00000466636 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
SRPRB-202ENST00000466636 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
SRPRB-202ENST00000466636 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
SRPRB-202ENST00000466636 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
SRPRB-202ENST00000466636 EPRSP07814 1512 aaKnown RBP14.61□□□□□ -0.07
SRPRB-202ENST00000466636 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
SRPRB-202ENST00000466636 NUP153P49790 1475 aaKnown RBP14.6□□□□□ -0.07
SRPRB-202ENST00000466636 RAPGEF6Q8TEU7 1601 aa14.58□□□□□ -0.08
SRPRB-202ENST00000466636 LRRIQ1Q96JM4 1722 aa14.58□□□□□ -0.08
SRPRB-202ENST00000466636 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
SRPRB-202ENST00000466636 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
SRPRB-202ENST00000466636 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
SRPRB-202ENST00000466636 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
SRPRB-202ENST00000466636 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
SRPRB-202ENST00000466636 EHBP1L1Q8N3D4 1523 aa14.56□□□□□ -0.08
SRPRB-202ENST00000466636 ABCA8O94911 1581 aa14.56□□□□□ -0.08
SRPRB-202ENST00000466636 PTPRGP23470 1445 aa14.55□□□□□ -0.08
SRPRB-202ENST00000466636 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
SRPRB-202ENST00000466636 CCNB3Q8WWL7 1395 aa14.53□□□□□ -0.08
SRPRB-202ENST00000466636 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
SRPRB-202ENST00000466636 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
SRPRB-202ENST00000466636 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
SRPRB-202ENST00000466636 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
SRPRB-202ENST00000466636 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
SRPRB-202ENST00000466636 UACAQ9BZF9 1416 aa14.48□□□□□ -0.09
SRPRB-202ENST00000466636 HRCP23327 699 aa14.47□□□□□ -0.09
SRPRB-202ENST00000466636 ATP10BO94823 1461 aa14.46□□□□□ -0.09
SRPRB-202ENST00000466636 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
SRPRB-202ENST00000466636 TROQ12816 1431 aaPredicted RBP14.45□□□□□ -0.1
SRPRB-202ENST00000466636 MYOM3Q5VTT5 1437 aa14.45□□□□□ -0.1
SRPRB-202ENST00000466636 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
SRPRB-202ENST00000466636 SUPT6HQ7KZ85 1726 aaKnown RBP14.45□□□□□ -0.1
SRPRB-202ENST00000466636 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
SRPRB-202ENST00000466636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.45□□□□□ -0.1
SRPRB-202ENST00000466636 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
SRPRB-202ENST00000466636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
SRPRB-202ENST00000466636 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
SRPRB-202ENST00000466636 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
SRPRB-202ENST00000466636 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
SRPRB-202ENST00000466636 MIA2Q96PC5 1412 aa14.38□□□□□ -0.11
SRPRB-202ENST00000466636 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
SRPRB-202ENST00000466636 ADCY10Q96PN6 1610 aa14.37□□□□□ -0.11
SRPRB-202ENST00000466636 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
SRPRB-202ENST00000466636 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
SRPRB-202ENST00000466636 KDM5BQ9UGL1 1544 aa14.35□□□□□ -0.11
SRPRB-202ENST00000466636 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
SRPRB-202ENST00000466636 KIF14Q15058 1648 aa14.33□□□□□ -0.11
SRPRB-202ENST00000466636 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.11
SRPRB-202ENST00000466636 ITGAEP38570 1179 aa14.33□□□□□ -0.12
SRPRB-202ENST00000466636 GPATCH8Q9UKJ3 1502 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms