RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
ARHGEF3-204ENST00000465659 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
ARHGEF3-204ENST00000465659 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
ARHGEF3-204ENST00000465659 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
ARHGEF3-204ENST00000465659 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
ARHGEF3-204ENST00000465659 CUL7Q14999 1698 aa18.58■□□□□ 0.56
ARHGEF3-204ENST00000465659 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.56
ARHGEF3-204ENST00000465659 PHLDB1Q86UU1 1377 aa18.58■□□□□ 0.56
ARHGEF3-204ENST00000465659 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
ARHGEF3-204ENST00000465659 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.56
ARHGEF3-204ENST00000465659 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
ARHGEF3-204ENST00000465659 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF3-204ENST00000465659 CTTNBP2Q8WZ74 1663 aa18.53■□□□□ 0.56
ARHGEF3-204ENST00000465659 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
ARHGEF3-204ENST00000465659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.56
ARHGEF3-204ENST00000465659 ITGAEP38570 1179 aa18.52■□□□□ 0.56
ARHGEF3-204ENST00000465659 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.55
ARHGEF3-204ENST00000465659 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
ARHGEF3-204ENST00000465659 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
ARHGEF3-204ENST00000465659 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
ARHGEF3-204ENST00000465659 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
ARHGEF3-204ENST00000465659 NESP48681 1621 aa18.43■□□□□ 0.54
ARHGEF3-204ENST00000465659 FMN1Q68DA7 1419 aa18.43■□□□□ 0.54
ARHGEF3-204ENST00000465659 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
ARHGEF3-204ENST00000465659 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
ARHGEF3-204ENST00000465659 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
ARHGEF3-204ENST00000465659 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
ARHGEF3-204ENST00000465659 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
ARHGEF3-204ENST00000465659 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
ARHGEF3-204ENST00000465659 FGD6Q6ZV73 1430 aa18.36■□□□□ 0.53
ARHGEF3-204ENST00000465659 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
ARHGEF3-204ENST00000465659 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF3-204ENST00000465659 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
ARHGEF3-204ENST00000465659 SIN3AQ96ST3 1273 aa18.31■□□□□ 0.52
ARHGEF3-204ENST00000465659 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
ARHGEF3-204ENST00000465659 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
ARHGEF3-204ENST00000465659 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
ARHGEF3-204ENST00000465659 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
ARHGEF3-204ENST00000465659 MTUS2Q5JR59 1369 aa18.27■□□□□ 0.52
ARHGEF3-204ENST00000465659 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
ARHGEF3-204ENST00000465659 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF3-204ENST00000465659 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
ARHGEF3-204ENST00000465659 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
ARHGEF3-204ENST00000465659 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
ARHGEF3-204ENST00000465659 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
ARHGEF3-204ENST00000465659 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
ARHGEF3-204ENST00000465659 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
ARHGEF3-204ENST00000465659 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
ARHGEF3-204ENST00000465659 MYT1Q01538 1121 aa18.2■□□□□ 0.5
ARHGEF3-204ENST00000465659 NAIPQ13075 1403 aa18.2■□□□□ 0.5
ARHGEF3-204ENST00000465659 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
ARHGEF3-204ENST00000465659 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
ARHGEF3-204ENST00000465659 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
ARHGEF3-204ENST00000465659 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
ARHGEF3-204ENST00000465659 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
ARHGEF3-204ENST00000465659 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.49
ARHGEF3-204ENST00000465659 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
ARHGEF3-204ENST00000465659 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
ARHGEF3-204ENST00000465659 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
ARHGEF3-204ENST00000465659 AKNAQ7Z591 1439 aa18.11■□□□□ 0.49
ARHGEF3-204ENST00000465659 IQGAP2Q13576 1575 aa18.1■□□□□ 0.49
ARHGEF3-204ENST00000465659 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
ARHGEF3-204ENST00000465659 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
ARHGEF3-204ENST00000465659 EPRSP07814 1512 aaKnown RBP18.06■□□□□ 0.48
ARHGEF3-204ENST00000465659 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
ARHGEF3-204ENST00000465659 ANP32CO43423 234 aa18.05■□□□□ 0.48
ARHGEF3-204ENST00000465659 WDR62O43379 1518 aa18.04■□□□□ 0.48
ARHGEF3-204ENST00000465659 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.47
ARHGEF3-204ENST00000465659 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF3-204ENST00000465659 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
ARHGEF3-204ENST00000465659 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
ARHGEF3-204ENST00000465659 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
ARHGEF3-204ENST00000465659 KDM6BO15054 1643 aa17.97■□□□□ 0.47
ARHGEF3-204ENST00000465659 RRP7BPQ9NSQ0 103 aa17.95■□□□□ 0.46
ARHGEF3-204ENST00000465659 TSHZ2Q9NRE2 1034 aa17.95■□□□□ 0.46
ARHGEF3-204ENST00000465659 ROCK1Q13464 1354 aa17.93■□□□□ 0.46
ARHGEF3-204ENST00000465659 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
ARHGEF3-204ENST00000465659 KIAA0586Q9BVV6 1533 aa17.91■□□□□ 0.46
ARHGEF3-204ENST00000465659 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
ARHGEF3-204ENST00000465659 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
ARHGEF3-204ENST00000465659 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
ARHGEF3-204ENST00000465659 FKBP8Q14318 412 aa17.89■□□□□ 0.45
ARHGEF3-204ENST00000465659 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
ARHGEF3-204ENST00000465659 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
ARHGEF3-204ENST00000465659 DAPK1P53355 1430 aa17.88■□□□□ 0.45
ARHGEF3-204ENST00000465659 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
ARHGEF3-204ENST00000465659 HSPA5P11021 654 aaKnown RBP17.86■□□□□ 0.45
ARHGEF3-204ENST00000465659 NUP153P49790 1475 aaKnown RBP17.86■□□□□ 0.45
ARHGEF3-204ENST00000465659 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
ARHGEF3-204ENST00000465659 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
ARHGEF3-204ENST00000465659 NEFLP07196 543 aa17.85■□□□□ 0.45
ARHGEF3-204ENST00000465659 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF3-204ENST00000465659 ABCC5O15440 1437 aa17.84■□□□□ 0.45
ARHGEF3-204ENST00000465659 ANKRD30BQ9BXX2 1392 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms