RNA–Protein interactions for RNA: ENST00000465180.5

HDGF-204, Transcript of heparin binding growth factor, humanhuman

TSL 1 (best)

Gene HDGF, Length 2,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-204ENST00000465180 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
HDGF-204ENST00000465180 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
HDGF-204ENST00000465180 CLIP1P30622 1438 aa24.64■■□□□ 1.54
HDGF-204ENST00000465180 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
HDGF-204ENST00000465180 CTTNBP2Q8WZ74 1663 aa24.56■■□□□ 1.52
HDGF-204ENST00000465180 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
HDGF-204ENST00000465180 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
HDGF-204ENST00000465180 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
HDGF-204ENST00000465180 ARHGAP35Q9NRY4 1499 aa24.48■■□□□ 1.51
HDGF-204ENST00000465180 NUP160Q12769 1436 aa24.47■■□□□ 1.51
HDGF-204ENST00000465180 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
HDGF-204ENST00000465180 CHD1O14646 1710 aa24.46■■□□□ 1.51
HDGF-204ENST00000465180 IQGAP2Q13576 1575 aa24.45■■□□□ 1.51
HDGF-204ENST00000465180 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
HDGF-204ENST00000465180 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
HDGF-204ENST00000465180 EFCAB5A4FU69 1503 aa24.36■■□□□ 1.49
HDGF-204ENST00000465180 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
HDGF-204ENST00000465180 VPS8Q8N3P4 1428 aa24.36■■□□□ 1.49
HDGF-204ENST00000465180 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
HDGF-204ENST00000465180 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
HDGF-204ENST00000465180 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
HDGF-204ENST00000465180 SAMD9Q5K651 1589 aa24.31■■□□□ 1.48
HDGF-204ENST00000465180 DISP1Q96F81 1524 aa24.25■■□□□ 1.47
HDGF-204ENST00000465180 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
HDGF-204ENST00000465180 TTBK1Q5TCY1 1321 aaPredicted RBP24.22■■□□□ 1.47
HDGF-204ENST00000465180 CARMIL2Q6F5E8 1435 aa24.21■■□□□ 1.47
HDGF-204ENST00000465180 KIAA0556O60303 1618 aa24.2■■□□□ 1.46
HDGF-204ENST00000465180 FMN1Q68DA7 1419 aa24.2■■□□□ 1.46
HDGF-204ENST00000465180 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
HDGF-204ENST00000465180 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
HDGF-204ENST00000465180 APLP2Q06481 763 aa24.19■■□□□ 1.46
HDGF-204ENST00000465180 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
HDGF-204ENST00000465180 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.46
HDGF-204ENST00000465180 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
HDGF-204ENST00000465180 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
HDGF-204ENST00000465180 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
HDGF-204ENST00000465180 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
HDGF-204ENST00000465180 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
HDGF-204ENST00000465180 PTPRGP23470 1445 aa24.02■■□□□ 1.44
HDGF-204ENST00000465180 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
HDGF-204ENST00000465180 ARID3CA6NKF2 412 aa23.98■■□□□ 1.43
HDGF-204ENST00000465180 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
HDGF-204ENST00000465180 TIAM1Q13009 1591 aa23.95■■□□□ 1.42
HDGF-204ENST00000465180 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
HDGF-204ENST00000465180 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
HDGF-204ENST00000465180 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
HDGF-204ENST00000465180 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
HDGF-204ENST00000465180 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
HDGF-204ENST00000465180 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
HDGF-204ENST00000465180 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
HDGF-204ENST00000465180 ABCA8O94911 1581 aa23.88■■□□□ 1.41
HDGF-204ENST00000465180 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
HDGF-204ENST00000465180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
HDGF-204ENST00000465180 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
HDGF-204ENST00000465180 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
HDGF-204ENST00000465180 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
HDGF-204ENST00000465180 CDK13Q14004 1512 aaKnown RBP23.86■■□□□ 1.41
HDGF-204ENST00000465180 UACAQ9BZF9 1416 aa23.85■■□□□ 1.41
HDGF-204ENST00000465180 MTUS2Q5JR59 1369 aa23.82■■□□□ 1.4
HDGF-204ENST00000465180 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
HDGF-204ENST00000465180 ATP10BO94823 1461 aa23.76■■□□□ 1.39
HDGF-204ENST00000465180 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
HDGF-204ENST00000465180 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
HDGF-204ENST00000465180 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
HDGF-204ENST00000465180 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
HDGF-204ENST00000465180 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
HDGF-204ENST00000465180 EHBP1L1Q8N3D4 1523 aa23.7■■□□□ 1.39
HDGF-204ENST00000465180 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
HDGF-204ENST00000465180 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
HDGF-204ENST00000465180 NCOA2Q15596 1464 aa23.64■■□□□ 1.38
HDGF-204ENST00000465180 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.38
HDGF-204ENST00000465180 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.37
HDGF-204ENST00000465180 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.37
HDGF-204ENST00000465180 ADCY10Q96PN6 1610 aa23.64■■□□□ 1.37
HDGF-204ENST00000465180 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.37
HDGF-204ENST00000465180 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
HDGF-204ENST00000465180 KDM5BQ9UGL1 1544 aa23.62■■□□□ 1.37
HDGF-204ENST00000465180 SUPT6HQ7KZ85 1726 aaKnown RBP23.62■■□□□ 1.37
HDGF-204ENST00000465180 ZCCHC11Q5TAX3 1644 aaKnown RBP23.58■■□□□ 1.37
HDGF-204ENST00000465180 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
HDGF-204ENST00000465180 RRBP1Q9P2E9 1410 aaKnown RBP23.56■■□□□ 1.36
HDGF-204ENST00000465180 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
HDGF-204ENST00000465180 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
HDGF-204ENST00000465180 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
HDGF-204ENST00000465180 KIF14Q15058 1648 aa23.51■■□□□ 1.35
HDGF-204ENST00000465180 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
HDGF-204ENST00000465180 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
HDGF-204ENST00000465180 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
HDGF-204ENST00000465180 NEUROD1Q13562 356 aa23.45■■□□□ 1.35
HDGF-204ENST00000465180 ITGAEP38570 1179 aa23.45■■□□□ 1.34
HDGF-204ENST00000465180 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
HDGF-204ENST00000465180 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
HDGF-204ENST00000465180 WDR7Q9Y4E6 1490 aa23.42■■□□□ 1.34
HDGF-204ENST00000465180 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
HDGF-204ENST00000465180 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
HDGF-204ENST00000465180 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
HDGF-204ENST00000465180 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
HDGF-204ENST00000465180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■□□□ 11.8
HDGF-204ENST00000465180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■□□□ 11.9
HDGF-204ENST00000465180 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms