RNA–Protein interactions for RNA: ENST00000464752.1

SRRM3-201, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-201ENST00000464752 LRRC9Q6ZRR7 1453 aa29.81■■■□□ 2.36
SRRM3-201ENST00000464752 PHLDB1Q86UU1 1377 aa29.81■■■□□ 2.36
SRRM3-201ENST00000464752 NESP48681 1621 aa29.79■■■□□ 2.36
SRRM3-201ENST00000464752 FAM50AQ14320 339 aaKnown RBP29.79■■■□□ 2.36
SRRM3-201ENST00000464752 MAP3K1Q13233 1512 aa29.77■■■□□ 2.36
SRRM3-201ENST00000464752 FHOD3Q2V2M9 1422 aa29.73■■■□□ 2.35
SRRM3-201ENST00000464752 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
SRRM3-201ENST00000464752 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
SRRM3-201ENST00000464752 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
SRRM3-201ENST00000464752 DNMBPQ6XZF7 1577 aa29.7■■■□□ 2.35
SRRM3-201ENST00000464752 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
SRRM3-201ENST00000464752 ABCA10Q8WWZ4 1543 aa29.68■■■□□ 2.34
SRRM3-201ENST00000464752 SETD5Q9C0A6 1442 aa29.68■■■□□ 2.34
SRRM3-201ENST00000464752 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
SRRM3-201ENST00000464752 SIN3AQ96ST3 1273 aa29.61■■■□□ 2.33
SRRM3-201ENST00000464752 MYT1Q01538 1121 aa29.59■■■□□ 2.33
SRRM3-201ENST00000464752 CFAP43Q8NDM7 1665 aa29.57■■■□□ 2.32
SRRM3-201ENST00000464752 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
SRRM3-201ENST00000464752 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.32
SRRM3-201ENST00000464752 FYCO1Q9BQS8 1478 aa29.51■■■□□ 2.31
SRRM3-201ENST00000464752 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
SRRM3-201ENST00000464752 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
SRRM3-201ENST00000464752 EFCAB5A4FU69 1503 aa29.47■■■□□ 2.31
SRRM3-201ENST00000464752 CUL7Q14999 1698 aa29.47■■■□□ 2.31
SRRM3-201ENST00000464752 CTTNBP2Q8WZ74 1663 aa29.42■■■□□ 2.3
SRRM3-201ENST00000464752 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
SRRM3-201ENST00000464752 KCNH8Q96L42 1107 aa29.41■■■□□ 2.3
SRRM3-201ENST00000464752 AQRO60306 1485 aaKnown RBP eCLIP29.41■■■□□ 2.3
SRRM3-201ENST00000464752 FMN1Q68DA7 1419 aa29.39■■■□□ 2.3
SRRM3-201ENST00000464752 MTUS2Q5JR59 1369 aa29.36■■■□□ 2.29
SRRM3-201ENST00000464752 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
SRRM3-201ENST00000464752 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
SRRM3-201ENST00000464752 DDX10Q13206 875 aaKnown RBP29.34■■■□□ 2.29
SRRM3-201ENST00000464752 HIRIP3Q9BW71 556 aaPredicted RBP29.34■■■□□ 2.29
SRRM3-201ENST00000464752 FGD6Q6ZV73 1430 aa29.34■■■□□ 2.29
SRRM3-201ENST00000464752 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
SRRM3-201ENST00000464752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.3■■■□□ 2.28
SRRM3-201ENST00000464752 PTPRKQ15262 1439 aa29.27■■■□□ 2.28
SRRM3-201ENST00000464752 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
SRRM3-201ENST00000464752 PPP1R15AO75807 674 aaPredicted RBP29.25■■■□□ 2.27
SRRM3-201ENST00000464752 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
SRRM3-201ENST00000464752 TIMELESSQ9UNS1 1208 aa29.22■■■□□ 2.27
SRRM3-201ENST00000464752 SAMD9Q5K651 1589 aa29.21■■■□□ 2.27
SRRM3-201ENST00000464752 SUPT16HQ9Y5B9 1047 aaKnown RBP29.21■■■□□ 2.27
SRRM3-201ENST00000464752 LRRIQ1Q96JM4 1722 aa29.21■■■□□ 2.27
SRRM3-201ENST00000464752 NCOA2Q15596 1464 aa29.18■■■□□ 2.26
SRRM3-201ENST00000464752 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
SRRM3-201ENST00000464752 CCDC18Q5T9S5 1454 aa29.18■■■□□ 2.26
SRRM3-201ENST00000464752 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
SRRM3-201ENST00000464752 MYOM3Q5VTT5 1437 aa29.13■■■□□ 2.25
SRRM3-201ENST00000464752 HFM1A2PYH4 1435 aa29.13■■■□□ 2.25
SRRM3-201ENST00000464752 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
SRRM3-201ENST00000464752 NAIPQ13075 1403 aa29.09■■■□□ 2.25
SRRM3-201ENST00000464752 ARID3CA6NKF2 412 aa29.08■■■□□ 2.25
SRRM3-201ENST00000464752 CHIC2Q9UKJ5 165 aa29.08■■■□□ 2.25
SRRM3-201ENST00000464752 PTPN23Q9H3S7 1636 aa29.07■■■□□ 2.24
SRRM3-201ENST00000464752 UACAQ9BZF9 1416 aa29.07■■■□□ 2.24
SRRM3-201ENST00000464752 RRP7BPQ9NSQ0 103 aa29.07■■■□□ 2.24
SRRM3-201ENST00000464752 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
SRRM3-201ENST00000464752 MAGI3Q5TCQ9 1506 aa29.05■■■□□ 2.24
SRRM3-201ENST00000464752 SUPT6HQ7KZ85 1726 aaKnown RBP29.03■■■□□ 2.24
SRRM3-201ENST00000464752 EHBP1L1Q8N3D4 1523 aa29.01■■■□□ 2.23
SRRM3-201ENST00000464752 THOC2Q8NI27 1593 aaKnown RBP28.98■■■□□ 2.23
SRRM3-201ENST00000464752 UGGT2Q9NYU1 1516 aa28.98■■■□□ 2.23
SRRM3-201ENST00000464752 ANP32CO43423 234 aa28.93■■■□□ 2.22
SRRM3-201ENST00000464752 TRIM52Q96A61 297 aa28.92■■■□□ 2.22
SRRM3-201ENST00000464752 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
SRRM3-201ENST00000464752 PBRM1Q86U86 1689 aa28.89■■■□□ 2.22
SRRM3-201ENST00000464752 CDK13Q14004 1512 aaKnown RBP28.89■■■□□ 2.22
SRRM3-201ENST00000464752 IQGAP2Q13576 1575 aa28.89■■■□□ 2.21
SRRM3-201ENST00000464752 EPRSP07814 1512 aaKnown RBP28.88■■■□□ 2.21
SRRM3-201ENST00000464752 BCANQ96GW7 911 aa28.84■■■□□ 2.21
SRRM3-201ENST00000464752 HECW1Q76N89 1606 aa28.84■■■□□ 2.21
SRRM3-201ENST00000464752 CCER2I3L3R5 266 aa28.84■■■□□ 2.21
SRRM3-201ENST00000464752 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
SRRM3-201ENST00000464752 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
SRRM3-201ENST00000464752 KDM5BQ9UGL1 1544 aa28.81■■■□□ 2.2
SRRM3-201ENST00000464752 FOXD1Q16676 465 aa28.8■■■□□ 2.2
SRRM3-201ENST00000464752 KDM6BO15054 1643 aa28.8■■■□□ 2.2
SRRM3-201ENST00000464752 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
SRRM3-201ENST00000464752 FKBP8Q14318 412 aa28.79■■■□□ 2.2
SRRM3-201ENST00000464752 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
SRRM3-201ENST00000464752 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
SRRM3-201ENST00000464752 MPHOSPH9Q99550 1183 aa28.76■■■□□ 2.19
SRRM3-201ENST00000464752 WDR62O43379 1518 aa28.74■■■□□ 2.19
SRRM3-201ENST00000464752 HSPA5P11021 654 aaKnown RBP28.72■■■□□ 2.19
SRRM3-201ENST00000464752 ZNF644Q9H582 1327 aaPredicted RBP28.71■■■□□ 2.19
SRRM3-201ENST00000464752 MIA2Q96PC5 1412 aa28.71■■■□□ 2.19
SRRM3-201ENST00000464752 TSHZ2Q9NRE2 1034 aa28.7■■■□□ 2.19
SRRM3-201ENST00000464752 GCC2Q8IWJ2 1684 aa28.7■■■□□ 2.18
SRRM3-201ENST00000464752 L3MBTL2Q969R5 705 aa28.67■■■□□ 2.18
SRRM3-201ENST00000464752 WASHC2AQ641Q2 1341 aa28.66■■■□□ 2.18
SRRM3-201ENST00000464752 AKNAQ7Z591 1439 aa28.65■■■□□ 2.18
SRRM3-201ENST00000464752 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
SRRM3-201ENST00000464752 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
SRRM3-201ENST00000464752 KIAA0586Q9BVV6 1533 aa28.6■■■□□ 2.17
SRRM3-201ENST00000464752 EIF4G2P78344 907 aaKnown RBP eCLIP28.6■■■□□ 2.17
SRRM3-201ENST00000464752 DAPK1P53355 1430 aa28.59■■■□□ 2.17
SRRM3-201ENST00000464752 NUP153P49790 1475 aaKnown RBP28.58■■■□□ 2.17
SRRM3-201ENST00000464752 ABCC5O15440 1437 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms