RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 CHD1O14646 1710 aa7.26□□□□□ -1.25
VPS72-203ENST00000463470 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
VPS72-203ENST00000463470 ABCA5Q8WWZ7 1642 aa7.24□□□□□ -1.25
VPS72-203ENST00000463470 FBLN2P98095 1184 aa7.24□□□□□ -1.25
VPS72-203ENST00000463470 CHMP7Q8WUX9 453 aaPredicted RBP7.23□□□□□ -1.25
VPS72-203ENST00000463470 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
VPS72-203ENST00000463470 NUP160Q12769 1436 aa7.22□□□□□ -1.25
VPS72-203ENST00000463470 GOLGA3Q08378 1498 aa7.22□□□□□ -1.25
VPS72-203ENST00000463470 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
VPS72-203ENST00000463470 GRIN2AQ12879 1464 aa7.2□□□□□ -1.26
VPS72-203ENST00000463470 BIVM-ERCC5R4GMW8 1640 aa7.19□□□□□ -1.26
VPS72-203ENST00000463470 FHAD1B1AJZ9 1412 aa7.18□□□□□ -1.26
VPS72-203ENST00000463470 CEP162Q5TB80 1403 aa7.18□□□□□ -1.26
VPS72-203ENST00000463470 ERICH3Q5RHP9 1530 aa7.17□□□□□ -1.26
VPS72-203ENST00000463470 ADAMTS12P58397 1594 aa7.17□□□□□ -1.26
VPS72-203ENST00000463470 KIF21BO75037 1637 aa7.17□□□□□ -1.26
VPS72-203ENST00000463470 SLC24A1O60721 1099 aa7.17□□□□□ -1.26
VPS72-203ENST00000463470 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
VPS72-203ENST00000463470 ERCC6L2Q5T890 1561 aa7.16□□□□□ -1.26
VPS72-203ENST00000463470 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
VPS72-203ENST00000463470 UBTFP17480 764 aaKnown RBP7.16□□□□□ -1.26
VPS72-203ENST00000463470 SHROOM2Q13796 1616 aa7.16□□□□□ -1.26
VPS72-203ENST00000463470 NPM3O75607 178 aaKnown RBP7.14□□□□□ -1.27
VPS72-203ENST00000463470 PIAS4Q8N2W9 510 aaPredicted RBP7.14□□□□□ -1.27
VPS72-203ENST00000463470 IGF1RP08069 1367 aa7.12□□□□□ -1.27
VPS72-203ENST00000463470 TRHP20396 242 aaPredicted RBP7.12□□□□□ -1.27
VPS72-203ENST00000463470 APLP2Q06481 763 aa7.12□□□□□ -1.27
VPS72-203ENST00000463470 PPARGC1BQ86YN6 1023 aaKnown RBP7.1□□□□□ -1.27
VPS72-203ENST00000463470 JPH4Q96JJ6 628 aa7.1□□□□□ -1.27
VPS72-203ENST00000463470 CLIP1P30622 1438 aa7.1□□□□□ -1.27
VPS72-203ENST00000463470 PRG4Q92954 1404 aaPredicted RBP7.1□□□□□ -1.27
VPS72-203ENST00000463470 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.27
VPS72-203ENST00000463470 RUSC2Q8N2Y8 1516 aa7.08□□□□□ -1.28
VPS72-203ENST00000463470 KIF27Q86VH2 1401 aa7.08□□□□□ -1.28
VPS72-203ENST00000463470 VPS8Q8N3P4 1428 aa7.08□□□□□ -1.28
VPS72-203ENST00000463470 KIAA0586Q9BVV6 1533 aa7.07□□□□□ -1.28
VPS72-203ENST00000463470 ZBTB22O15209 634 aa7.07□□□□□ -1.28
VPS72-203ENST00000463470 PRXQ9BXM0 1461 aa7.04□□□□□ -1.28
VPS72-203ENST00000463470 RTN4Q9NQC3 1192 aaKnown RBP7.04□□□□□ -1.28
VPS72-203ENST00000463470 MAPKBP1O60336 1514 aa7.04□□□□□ -1.28
VPS72-203ENST00000463470 ABCC10Q5T3U5 1492 aa7.04□□□□□ -1.28
VPS72-203ENST00000463470 CLSPNQ9HAW4 1339 aa7.03□□□□□ -1.28
VPS72-203ENST00000463470 CARMIL1Q5VZK9 1371 aa7.02□□□□□ -1.29
VPS72-203ENST00000463470 ADCY10Q96PN6 1610 aa7.01□□□□□ -1.29
VPS72-203ENST00000463470 CUL7Q14999 1698 aa7.01□□□□□ -1.29
VPS72-203ENST00000463470 RAPGEF2Q9Y4G8 1499 aa7.01□□□□□ -1.29
VPS72-203ENST00000463470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.99□□□□□ -1.29
VPS72-203ENST00000463470 AMER1Q5JTC6 1135 aaPredicted RBP6.99□□□□□ -1.29
VPS72-203ENST00000463470 DIP2BQ9P265 1576 aa6.99□□□□□ -1.29
VPS72-203ENST00000463470 UHRF1BP1LA0JNW5 1464 aa6.98□□□□□ -1.29
VPS72-203ENST00000463470 DISP1Q96F81 1524 aa6.98□□□□□ -1.29
VPS72-203ENST00000463470 PTPRGP23470 1445 aa6.98□□□□□ -1.29
VPS72-203ENST00000463470 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
VPS72-203ENST00000463470 ABCC2Q92887 1545 aa6.97□□□□□ -1.29
VPS72-203ENST00000463470 KIF13AQ9H1H9 1805 aa6.97□□□□□ -1.29
VPS72-203ENST00000463470 FAM69CQ0P6D2 419 aa6.97□□□□□ -1.29
VPS72-203ENST00000463470 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
VPS72-203ENST00000463470 UGGT2Q9NYU1 1516 aa6.96□□□□□ -1.3
VPS72-203ENST00000463470 KDM5BQ9UGL1 1544 aa6.95□□□□□ -1.3
VPS72-203ENST00000463470 IQGAP2Q13576 1575 aa6.95□□□□□ -1.3
VPS72-203ENST00000463470 CARMIL2Q6F5E8 1435 aa6.94□□□□□ -1.3
VPS72-203ENST00000463470 UACAQ9BZF9 1416 aa6.94□□□□□ -1.3
VPS72-203ENST00000463470 CENPBP07199 599 aaPredicted RBP6.94□□□□□ -1.3
VPS72-203ENST00000463470 GLI2P10070 1586 aa6.94□□□□□ -1.3
VPS72-203ENST00000463470 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
VPS72-203ENST00000463470 ZNF316A6NFI3 1004 aaPredicted RBP6.93□□□□□ -1.3
VPS72-203ENST00000463470 NPM1P06748 294 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS72-203ENST00000463470 DIEXFQ68CQ4 756 aaKnown RBP6.93□□□□□ -1.3
VPS72-203ENST00000463470 FOXD4L1Q9NU39 408 aa6.93□□□□□ -1.3
VPS72-203ENST00000463470 SCAF1Q9H7N4 1312 aaKnown RBP6.93□□□□□ -1.3
VPS72-203ENST00000463470 PLB1Q6P1J6 1458 aa6.92□□□□□ -1.3
VPS72-203ENST00000463470 PELP1Q8IZL8 1130 aaKnown RBP6.92□□□□□ -1.3
VPS72-203ENST00000463470 RRBP1Q9P2E9 1410 aaKnown RBP6.92□□□□□ -1.3
VPS72-203ENST00000463470 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
VPS72-203ENST00000463470 EPRSP07814 1512 aaKnown RBP6.91□□□□□ -1.3
VPS72-203ENST00000463470 KDM4FA0A1W2PPD8 638 aa6.9□□□□□ -1.3
VPS72-203ENST00000463470 ARHGAP35Q9NRY4 1499 aa6.89□□□□□ -1.31
VPS72-203ENST00000463470 KIAA0556O60303 1618 aa6.89□□□□□ -1.31
VPS72-203ENST00000463470 PPRC1Q5VV67 1664 aaKnown RBP6.88□□□□□ -1.31
VPS72-203ENST00000463470 EFCAB5A4FU69 1503 aa6.88□□□□□ -1.31
VPS72-203ENST00000463470 CCNB3Q8WWL7 1395 aa6.88□□□□□ -1.31
VPS72-203ENST00000463470 HNRNPUL2Q1KMD3 747 aaKnown RBP6.88□□□□□ -1.31
VPS72-203ENST00000463470 ABCA8O94911 1581 aa6.87□□□□□ -1.31
VPS72-203ENST00000463470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS72-203ENST00000463470 TTBK1Q5TCY1 1321 aaPredicted RBP6.87□□□□□ -1.31
VPS72-203ENST00000463470 ACIN1Q9UKV3 1341 aaKnown RBP6.87□□□□□ -1.31
VPS72-203ENST00000463470 TIMELESSQ9UNS1 1208 aa6.87□□□□□ -1.31
VPS72-203ENST00000463470 KDM6BO15054 1643 aa6.87□□□□□ -1.31
VPS72-203ENST00000463470 MAP3K4Q9Y6R4 1608 aa6.86□□□□□ -1.31
VPS72-203ENST00000463470 WDR7Q9Y4E6 1490 aa6.85□□□□□ -1.31
VPS72-203ENST00000463470 FMN1Q68DA7 1419 aa6.85□□□□□ -1.31
VPS72-203ENST00000463470 MAGI3Q5TCQ9 1506 aa6.85□□□□□ -1.31
VPS72-203ENST00000463470 ZCCHC11Q5TAX3 1644 aaKnown RBP6.84□□□□□ -1.31
VPS72-203ENST00000463470 TIAM1Q13009 1591 aa6.84□□□□□ -1.31
VPS72-203ENST00000463470 RANGAP1P46060 587 aaPredicted RBP6.83□□□□□ -1.32
VPS72-203ENST00000463470 TEX14Q8IWB6 1497 aa6.83□□□□□ -1.32
VPS72-203ENST00000463470 FYCO1Q9BQS8 1478 aa6.83□□□□□ -1.32
VPS72-203ENST00000463470 CASKIN1Q8WXD9 1431 aa6.83□□□□□ -1.32
VPS72-203ENST00000463470 DHX57Q6P158 1386 aaKnown RBP6.82□□□□□ -1.32
VPS72-203ENST00000463470 ATP10BO94823 1461 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms