RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
GARNL3-212ENST00000463005 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
GARNL3-212ENST00000463005 MAGI1Q96QZ7 1491 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-212ENST00000463005 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
GARNL3-212ENST00000463005 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
GARNL3-212ENST00000463005 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
GARNL3-212ENST00000463005 CUX1P39880 1505 aa14.56□□□□□ -0.08
GARNL3-212ENST00000463005 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
GARNL3-212ENST00000463005 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
GARNL3-212ENST00000463005 PBRM1Q86U86 1689 aa14.54□□□□□ -0.08
GARNL3-212ENST00000463005 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
GARNL3-212ENST00000463005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
GARNL3-212ENST00000463005 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
GARNL3-212ENST00000463005 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
GARNL3-212ENST00000463005 NUP160Q12769 1436 aa14.39□□□□□ -0.11
GARNL3-212ENST00000463005 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
GARNL3-212ENST00000463005 CEP170Q5SW79 1584 aa14.38□□□□□ -0.11
GARNL3-212ENST00000463005 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
GARNL3-212ENST00000463005 SHROOM2Q13796 1616 aa14.36□□□□□ -0.11
GARNL3-212ENST00000463005 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
GARNL3-212ENST00000463005 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
GARNL3-212ENST00000463005 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
GARNL3-212ENST00000463005 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
GARNL3-212ENST00000463005 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
GARNL3-212ENST00000463005 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
GARNL3-212ENST00000463005 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
GARNL3-212ENST00000463005 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
GARNL3-212ENST00000463005 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
GARNL3-212ENST00000463005 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
GARNL3-212ENST00000463005 PRG4Q92954 1404 aaPredicted RBP14.27□□□□□ -0.12
GARNL3-212ENST00000463005 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
GARNL3-212ENST00000463005 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
GARNL3-212ENST00000463005 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
GARNL3-212ENST00000463005 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
GARNL3-212ENST00000463005 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
GARNL3-212ENST00000463005 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
GARNL3-212ENST00000463005 DIP2BQ9P265 1576 aa14.14□□□□□ -0.15
GARNL3-212ENST00000463005 KDM6BO15054 1643 aa14.12□□□□□ -0.15
GARNL3-212ENST00000463005 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
GARNL3-212ENST00000463005 KIAA0586Q9BVV6 1533 aa14.11□□□□□ -0.15
GARNL3-212ENST00000463005 TSPOAP1O95153 1857 aa14.1□□□□□ -0.15
GARNL3-212ENST00000463005 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-212ENST00000463005 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
GARNL3-212ENST00000463005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
GARNL3-212ENST00000463005 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
GARNL3-212ENST00000463005 IGF1RP08069 1367 aa14.06□□□□□ -0.16
GARNL3-212ENST00000463005 CUL7Q14999 1698 aa14.04□□□□□ -0.16
GARNL3-212ENST00000463005 PTPRGP23470 1445 aa14.04□□□□□ -0.16
GARNL3-212ENST00000463005 KIF27Q86VH2 1401 aa14.04□□□□□ -0.16
GARNL3-212ENST00000463005 FKBP8Q14318 412 aa14.02□□□□□ -0.17
GARNL3-212ENST00000463005 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
GARNL3-212ENST00000463005 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
GARNL3-212ENST00000463005 GLI2P10070 1586 aa13.98□□□□□ -0.17
GARNL3-212ENST00000463005 PLB1Q6P1J6 1458 aa13.98□□□□□ -0.17
GARNL3-212ENST00000463005 ABCC2Q92887 1545 aa13.97□□□□□ -0.17
GARNL3-212ENST00000463005 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
GARNL3-212ENST00000463005 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
GARNL3-212ENST00000463005 ASXL2Q76L83 1435 aa13.95□□□□□ -0.18
GARNL3-212ENST00000463005 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-212ENST00000463005 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
GARNL3-212ENST00000463005 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-212ENST00000463005 PPRC1Q5VV67 1664 aaKnown RBP13.94□□□□□ -0.18
GARNL3-212ENST00000463005 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
GARNL3-212ENST00000463005 IQGAP2Q13576 1575 aa13.91□□□□□ -0.18
GARNL3-212ENST00000463005 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-212ENST00000463005 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
GARNL3-212ENST00000463005 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
GARNL3-212ENST00000463005 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
GARNL3-212ENST00000463005 MAP3K4Q9Y6R4 1608 aa13.87□□□□□ -0.19
GARNL3-212ENST00000463005 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
GARNL3-212ENST00000463005 EPRSP07814 1512 aaKnown RBP13.86□□□□□ -0.19
GARNL3-212ENST00000463005 COL17A1Q9UMD9 1497 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-212ENST00000463005 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
GARNL3-212ENST00000463005 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
GARNL3-212ENST00000463005 UGGT2Q9NYU1 1516 aa13.82□□□□□ -0.2
GARNL3-212ENST00000463005 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
GARNL3-212ENST00000463005 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
GARNL3-212ENST00000463005 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
GARNL3-212ENST00000463005 KIAA0556O60303 1618 aa13.77□□□□□ -0.21
GARNL3-212ENST00000463005 APLP2Q06481 763 aa13.77□□□□□ -0.21
GARNL3-212ENST00000463005 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
GARNL3-212ENST00000463005 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
GARNL3-212ENST00000463005 MAGI3Q5TCQ9 1506 aa13.74□□□□□ -0.21
GARNL3-212ENST00000463005 CD109Q6YHK3 1445 aa13.74□□□□□ -0.21
GARNL3-212ENST00000463005 CAPN15O75808 1086 aa13.72□□□□□ -0.21
GARNL3-212ENST00000463005 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
GARNL3-212ENST00000463005 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
GARNL3-212ENST00000463005 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-212ENST00000463005 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
GARNL3-212ENST00000463005 ABCA8O94911 1581 aa13.68□□□□□ -0.22
GARNL3-212ENST00000463005 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-212ENST00000463005 ARAP3Q8WWN8 1544 aa13.65□□□□□ -0.22
GARNL3-212ENST00000463005 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.22
GARNL3-212ENST00000463005 POLA2Q14181 598 aa13.64□□□□□ -0.23
GARNL3-212ENST00000463005 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
GARNL3-212ENST00000463005 KIF21BO75037 1637 aa13.63□□□□□ -0.23
GARNL3-212ENST00000463005 ABCB7O75027 752 aa13.61□□□□□ -0.23
GARNL3-212ENST00000463005 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
GARNL3-212ENST00000463005 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
GARNL3-212ENST00000463005 ATP10BO94823 1461 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms