RNA–Protein interactions for RNA: ENST00000462991.5

CHD5-203, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 1 (best)

Gene CHD5, Length 4,396 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-203ENST00000462991 KIF21BO75037 1637 aa14.32□□□□□ -0.12
CHD5-203ENST00000462991 NESP48681 1621 aa14.31□□□□□ -0.12
CHD5-203ENST00000462991 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
CHD5-203ENST00000462991 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
CHD5-203ENST00000462991 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD5-203ENST00000462991 DAXXQ9UER7 740 aaPredicted RBP14.3□□□□□ -0.12
CHD5-203ENST00000462991 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
CHD5-203ENST00000462991 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
CHD5-203ENST00000462991 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
CHD5-203ENST00000462991 BCANQ96GW7 911 aa14.26□□□□□ -0.13
CHD5-203ENST00000462991 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
CHD5-203ENST00000462991 IGF1RP08069 1367 aa14.24□□□□□ -0.13
CHD5-203ENST00000462991 PRXQ9BXM0 1461 aa14.23□□□□□ -0.13
CHD5-203ENST00000462991 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
CHD5-203ENST00000462991 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
CHD5-203ENST00000462991 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
CHD5-203ENST00000462991 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
CHD5-203ENST00000462991 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
CHD5-203ENST00000462991 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
CHD5-203ENST00000462991 ANP32CO43423 234 aa14.18□□□□□ -0.14
CHD5-203ENST00000462991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD5-203ENST00000462991 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
CHD5-203ENST00000462991 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
CHD5-203ENST00000462991 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
CHD5-203ENST00000462991 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
CHD5-203ENST00000462991 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
CHD5-203ENST00000462991 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
CHD5-203ENST00000462991 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
CHD5-203ENST00000462991 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
CHD5-203ENST00000462991 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
CHD5-203ENST00000462991 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
CHD5-203ENST00000462991 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
CHD5-203ENST00000462991 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
CHD5-203ENST00000462991 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
CHD5-203ENST00000462991 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
CHD5-203ENST00000462991 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
CHD5-203ENST00000462991 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
CHD5-203ENST00000462991 KDM2AQ9Y2K7 1162 aa14.01□□□□□ -0.17
CHD5-203ENST00000462991 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
CHD5-203ENST00000462991 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CHD5-203ENST00000462991 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
CHD5-203ENST00000462991 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
CHD5-203ENST00000462991 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
CHD5-203ENST00000462991 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
CHD5-203ENST00000462991 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
CHD5-203ENST00000462991 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHD5-203ENST00000462991 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
CHD5-203ENST00000462991 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
CHD5-203ENST00000462991 MIER1Q8N108 512 aa13.96□□□□□ -0.17
CHD5-203ENST00000462991 BCL11AQ9H165 835 aa13.96□□□□□ -0.17
CHD5-203ENST00000462991 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
CHD5-203ENST00000462991 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
CHD5-203ENST00000462991 RAB3GAP2Q9H2M9 1393 aa13.95□□□□□ -0.18
CHD5-203ENST00000462991 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
CHD5-203ENST00000462991 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
CHD5-203ENST00000462991 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
CHD5-203ENST00000462991 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
CHD5-203ENST00000462991 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
CHD5-203ENST00000462991 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
CHD5-203ENST00000462991 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
CHD5-203ENST00000462991 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
CHD5-203ENST00000462991 TIAM1Q13009 1591 aa13.87□□□□□ -0.19
CHD5-203ENST00000462991 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
CHD5-203ENST00000462991 PCF11O94913 1555 aaKnown RBP13.87□□□□□ -0.19
CHD5-203ENST00000462991 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
CHD5-203ENST00000462991 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD5-203ENST00000462991 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD5-203ENST00000462991 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
CHD5-203ENST00000462991 FKBP8Q14318 412 aa13.83□□□□□ -0.19
CHD5-203ENST00000462991 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.19
CHD5-203ENST00000462991 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
CHD5-203ENST00000462991 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
CHD5-203ENST00000462991 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
CHD5-203ENST00000462991 CUL7Q14999 1698 aa13.81□□□□□ -0.2
CHD5-203ENST00000462991 FOXD1Q16676 465 aa13.8□□□□□ -0.2
CHD5-203ENST00000462991 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
CHD5-203ENST00000462991 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
CHD5-203ENST00000462991 EFCAB5A4FU69 1503 aa13.79□□□□□ -0.2
CHD5-203ENST00000462991 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
CHD5-203ENST00000462991 PTPRGP23470 1445 aa13.78□□□□□ -0.2
CHD5-203ENST00000462991 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
CHD5-203ENST00000462991 NEFMP07197 916 aa13.78□□□□□ -0.2
CHD5-203ENST00000462991 HNRNPMP52272 730 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD5-203ENST00000462991 EFCAB2Q5VUJ9 269 aa13.76□□□□□ -0.21
CHD5-203ENST00000462991 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
CHD5-203ENST00000462991 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
CHD5-203ENST00000462991 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
CHD5-203ENST00000462991 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
CHD5-203ENST00000462991 PKD2Q13563 968 aa13.74□□□□□ -0.21
CHD5-203ENST00000462991 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
CHD5-203ENST00000462991 SNAPC4Q5SXM2 1469 aa13.73□□□□□ -0.21
CHD5-203ENST00000462991 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
CHD5-203ENST00000462991 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
CHD5-203ENST00000462991 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
CHD5-203ENST00000462991 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
CHD5-203ENST00000462991 GGT6Q6P531 493 aa13.7□□□□□ -0.22
CHD5-203ENST00000462991 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
CHD5-203ENST00000462991 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
CHD5-203ENST00000462991 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
CHD5-203ENST00000462991 DCAF11Q8TEB1 546 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms