RNA–Protein interactions for RNA: ENST00000462991.5

CHD5-203, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 1 (best)

Gene CHD5, Length 4,396 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-203ENST00000462991 NISCHQ9Y2I1 1504 aa19.8■□□□□ 0.76
CHD5-203ENST00000462991 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
CHD5-203ENST00000462991 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.39
CHD5-203ENST00000462991 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
CHD5-203ENST00000462991 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
CHD5-203ENST00000462991 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
CHD5-203ENST00000462991 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.23
CHD5-203ENST00000462991 ABCC9O60706 1549 aa16.42■□□□□ 0.22
CHD5-203ENST00000462991 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
CHD5-203ENST00000462991 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
CHD5-203ENST00000462991 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
CHD5-203ENST00000462991 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
CHD5-203ENST00000462991 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHD5-203ENST00000462991 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
CHD5-203ENST00000462991 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.14
CHD5-203ENST00000462991 RANGAP1P46060 587 aaPredicted RBP15.89■□□□□ 0.13
CHD5-203ENST00000462991 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
CHD5-203ENST00000462991 APLP2Q06481 763 aa15.84■□□□□ 0.13
CHD5-203ENST00000462991 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
CHD5-203ENST00000462991 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.12
CHD5-203ENST00000462991 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
CHD5-203ENST00000462991 NACADO15069 1562 aa15.69■□□□□ 0.1
CHD5-203ENST00000462991 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
CHD5-203ENST00000462991 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
CHD5-203ENST00000462991 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
CHD5-203ENST00000462991 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
CHD5-203ENST00000462991 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
CHD5-203ENST00000462991 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
CHD5-203ENST00000462991 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
CHD5-203ENST00000462991 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
CHD5-203ENST00000462991 WIZO95785 1651 aa15.33■□□□□ 0.04
CHD5-203ENST00000462991 HRCP23327 699 aa15.31■□□□□ 0.04
CHD5-203ENST00000462991 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
CHD5-203ENST00000462991 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
CHD5-203ENST00000462991 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
CHD5-203ENST00000462991 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
CHD5-203ENST00000462991 ITGAEP38570 1179 aa15.14■□□□□ 0.01
CHD5-203ENST00000462991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
CHD5-203ENST00000462991 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
CHD5-203ENST00000462991 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
CHD5-203ENST00000462991 YTHDC1Q96MU7 727 aaKnown RBP15.1■□□□□ 0.01
CHD5-203ENST00000462991 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
CHD5-203ENST00000462991 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
CHD5-203ENST00000462991 ABCC8Q09428 1581 aa15.06■□□□□ 0
CHD5-203ENST00000462991 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
CHD5-203ENST00000462991 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
CHD5-203ENST00000462991 FBLN2P98095 1184 aa14.99□□□□□ -0.01
CHD5-203ENST00000462991 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
CHD5-203ENST00000462991 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
CHD5-203ENST00000462991 BICRAQ9NZM4 1560 aa14.93□□□□□ -0.02
CHD5-203ENST00000462991 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
CHD5-203ENST00000462991 SOGA1O94964 1423 aa14.92□□□□□ -0.02
CHD5-203ENST00000462991 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
CHD5-203ENST00000462991 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
CHD5-203ENST00000462991 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
CHD5-203ENST00000462991 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
CHD5-203ENST00000462991 NEFLP07196 543 aa14.85□□□□□ -0.03
CHD5-203ENST00000462991 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
CHD5-203ENST00000462991 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
CHD5-203ENST00000462991 RUSC2Q8N2Y8 1516 aa14.79□□□□□ -0.04
CHD5-203ENST00000462991 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
CHD5-203ENST00000462991 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.05
CHD5-203ENST00000462991 CNGB1Q14028 1251 aaPredicted RBP14.74□□□□□ -0.05
CHD5-203ENST00000462991 EEA1Q15075 1411 aa14.7□□□□□ -0.06
CHD5-203ENST00000462991 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
CHD5-203ENST00000462991 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
CHD5-203ENST00000462991 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
CHD5-203ENST00000462991 CLIP1P30622 1438 aa14.63□□□□□ -0.07
CHD5-203ENST00000462991 MYT1Q01538 1121 aa14.63□□□□□ -0.07
CHD5-203ENST00000462991 TRIM52Q96A61 297 aa14.62□□□□□ -0.07
CHD5-203ENST00000462991 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
CHD5-203ENST00000462991 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
CHD5-203ENST00000462991 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.07
CHD5-203ENST00000462991 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
CHD5-203ENST00000462991 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
CHD5-203ENST00000462991 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
CHD5-203ENST00000462991 PEG3Q9GZU2 1588 aa14.57□□□□□ -0.08
CHD5-203ENST00000462991 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
CHD5-203ENST00000462991 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
CHD5-203ENST00000462991 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
CHD5-203ENST00000462991 CDK11AQ9UQ88 783 aaPredicted RBP14.51□□□□□ -0.09
CHD5-203ENST00000462991 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
CHD5-203ENST00000462991 CUX2O14529 1486 aa14.46□□□□□ -0.09
CHD5-203ENST00000462991 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
CHD5-203ENST00000462991 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
CHD5-203ENST00000462991 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
CHD5-203ENST00000462991 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
CHD5-203ENST00000462991 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
CHD5-203ENST00000462991 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
CHD5-203ENST00000462991 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
CHD5-203ENST00000462991 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
CHD5-203ENST00000462991 CFTRP13569 1480 aa14.38□□□□□ -0.11
CHD5-203ENST00000462991 ZNF326Q5BKZ1 582 aaKnown RBP14.38□□□□□ -0.11
CHD5-203ENST00000462991 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
CHD5-203ENST00000462991 CUX1P39880 1505 aa14.38□□□□□ -0.11
CHD5-203ENST00000462991 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
CHD5-203ENST00000462991 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
CHD5-203ENST00000462991 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
CHD5-203ENST00000462991 KANK4Q5T7N3 995 aaPredicted RBP14.33□□□□□ -0.12
CHD5-203ENST00000462991 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms