RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CTTNBP2Q8WZ74 1663 aa31.69■■■□□ 2.66
XPA-202ENST00000462523 SHROOM2Q13796 1616 aa31.68■■■□□ 2.66
XPA-202ENST00000462523 IQGAP2Q13576 1575 aa31.65■■■□□ 2.66
XPA-202ENST00000462523 GOLGA3Q08378 1498 aa31.64■■■□□ 2.65
XPA-202ENST00000462523 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
XPA-202ENST00000462523 ARHGEF11O15085 1522 aa31.58■■■□□ 2.65
XPA-202ENST00000462523 JPH4Q96JJ6 628 aa31.56■■■□□ 2.64
XPA-202ENST00000462523 ERCC6L2Q5T890 1561 aa31.56■■■□□ 2.64
XPA-202ENST00000462523 RIMBP3CA6NJZ7 1639 aa31.55■■■□□ 2.64
XPA-202ENST00000462523 RIMBP3BA6NNM3 1639 aa31.55■■■□□ 2.64
XPA-202ENST00000462523 RIMBP3Q9UFD9 1639 aa31.55■■■□□ 2.64
XPA-202ENST00000462523 PRG4Q92954 1404 aaPredicted RBP31.49■■■□□ 2.63
XPA-202ENST00000462523 UGGT2Q9NYU1 1516 aa31.49■■■□□ 2.63
XPA-202ENST00000462523 UBTFP17480 764 aaKnown RBP31.46■■■□□ 2.63
XPA-202ENST00000462523 DISP1Q96F81 1524 aa31.42■■■□□ 2.62
XPA-202ENST00000462523 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
XPA-202ENST00000462523 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
XPA-202ENST00000462523 KIAA0556O60303 1618 aa31.35■■■□□ 2.61
XPA-202ENST00000462523 SAMD9Q5K651 1589 aa31.32■■■□□ 2.6
XPA-202ENST00000462523 TNIKQ9UKE5 1360 aa31.32■■■□□ 2.6
XPA-202ENST00000462523 CARMIL2Q6F5E8 1435 aa31.3■■■□□ 2.6
XPA-202ENST00000462523 RANGAP1P46060 587 aaPredicted RBP31.28■■■□□ 2.6
XPA-202ENST00000462523 EFCAB5A4FU69 1503 aa31.21■■■□□ 2.59
XPA-202ENST00000462523 CYB5RLQ6IPT4 315 aa31.2■■■□□ 2.58
XPA-202ENST00000462523 ARHGAP35Q9NRY4 1499 aa31.17■■■□□ 2.58
XPA-202ENST00000462523 P3H3Q8IVL6 736 aa31.17■■■□□ 2.58
XPA-202ENST00000462523 PTPRGP23470 1445 aa31.15■■■□□ 2.58
XPA-202ENST00000462523 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
XPA-202ENST00000462523 TTBK1Q5TCY1 1321 aaPredicted RBP31.11■■■□□ 2.57
XPA-202ENST00000462523 CLIP1P30622 1438 aa31.08■■■□□ 2.57
XPA-202ENST00000462523 CEP162Q5TB80 1403 aa31.08■■■□□ 2.57
XPA-202ENST00000462523 ADCY10Q96PN6 1610 aa31.03■■■□□ 2.56
XPA-202ENST00000462523 PLB1Q6P1J6 1458 aa31.01■■■□□ 2.55
XPA-202ENST00000462523 ABCA8O94911 1581 aa30.99■■■□□ 2.55
XPA-202ENST00000462523 UACAQ9BZF9 1416 aa30.97■■■□□ 2.55
XPA-202ENST00000462523 ABCC2Q92887 1545 aa30.94■■■□□ 2.54
XPA-202ENST00000462523 UHRF1BP1LA0JNW5 1464 aa30.94■■■□□ 2.54
XPA-202ENST00000462523 RAPGEF6Q8TEU7 1601 aa30.89■■■□□ 2.54
XPA-202ENST00000462523 FMN1Q68DA7 1419 aa30.88■■■□□ 2.53
XPA-202ENST00000462523 KDM5BQ9UGL1 1544 aa30.81■■■□□ 2.52
XPA-202ENST00000462523 NUP153P49790 1475 aaKnown RBP30.8■■■□□ 2.52
XPA-202ENST00000462523 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
XPA-202ENST00000462523 ZCCHC11Q5TAX3 1644 aaKnown RBP30.78■■■□□ 2.52
XPA-202ENST00000462523 CASKIN1Q8WXD9 1431 aa30.73■■■□□ 2.51
XPA-202ENST00000462523 LRRIQ1Q96JM4 1722 aa30.72■■■□□ 2.51
XPA-202ENST00000462523 HECW1Q76N89 1606 aa30.72■■■□□ 2.51
XPA-202ENST00000462523 ATP10BO94823 1461 aa30.72■■■□□ 2.51
XPA-202ENST00000462523 ARID3CA6NKF2 412 aa30.71■■■□□ 2.51
XPA-202ENST00000462523 MAPKBP1O60336 1514 aa30.69■■■□□ 2.5
XPA-202ENST00000462523 FYCO1Q9BQS8 1478 aa30.68■■■□□ 2.5
XPA-202ENST00000462523 NPM1P06748 294 aaKnown RBP eCLIP30.68■■■□□ 2.5
XPA-202ENST00000462523 VPS8Q8N3P4 1428 aa30.66■■■□□ 2.5
XPA-202ENST00000462523 CDK13Q14004 1512 aaKnown RBP30.65■■■□□ 2.5
XPA-202ENST00000462523 EPRSP07814 1512 aaKnown RBP30.64■■■□□ 2.5
XPA-202ENST00000462523 ATP1B4Q9UN42 357 aaPredicted RBP30.62■■■□□ 2.49
XPA-202ENST00000462523 ASXL2Q76L83 1435 aa30.61■■■□□ 2.49
XPA-202ENST00000462523 CCDC18Q5T9S5 1454 aa30.53■■■□□ 2.48
XPA-202ENST00000462523 WDR7Q9Y4E6 1490 aa30.52■■■□□ 2.48
XPA-202ENST00000462523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.47
XPA-202ENST00000462523 HNRNPUL2Q1KMD3 747 aaKnown RBP30.51■■■□□ 2.47
XPA-202ENST00000462523 DIP2BQ9P265 1576 aa30.49■■■□□ 2.47
XPA-202ENST00000462523 ABCC10Q5T3U5 1492 aa30.48■■■□□ 2.47
XPA-202ENST00000462523 KIF13AQ9H1H9 1805 aa30.48■■■□□ 2.47
XPA-202ENST00000462523 MAGI3Q5TCQ9 1506 aa30.44■■■□□ 2.46
XPA-202ENST00000462523 CFAP43Q8NDM7 1665 aa30.43■■■□□ 2.46
XPA-202ENST00000462523 TIAM1Q13009 1591 aa30.39■■■□□ 2.46
XPA-202ENST00000462523 PLEKHD1A6NEE1 506 aa30.39■■■□□ 2.46
XPA-202ENST00000462523 GLI2P10070 1586 aa30.37■■■□□ 2.45
XPA-202ENST00000462523 KCNH8Q96L42 1107 aa30.37■■■□□ 2.45
XPA-202ENST00000462523 TRHP20396 242 aaPredicted RBP30.36■■■□□ 2.45
XPA-202ENST00000462523 FAM69CQ0P6D2 419 aa30.35■■■□□ 2.45
XPA-202ENST00000462523 TROQ12816 1431 aaPredicted RBP30.35■■■□□ 2.45
XPA-202ENST00000462523 MAP3K1Q13233 1512 aa30.33■■■□□ 2.45
XPA-202ENST00000462523 CDK11AQ9UQ88 783 aaPredicted RBP30.33■■■□□ 2.45
XPA-202ENST00000462523 KIF14Q15058 1648 aa30.32■■■□□ 2.44
XPA-202ENST00000462523 MAP3K4Q9Y6R4 1608 aa30.3■■■□□ 2.44
XPA-202ENST00000462523 ABCA9Q8IUA7 1624 aa30.29■■■□□ 2.44
XPA-202ENST00000462523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.44
XPA-202ENST00000462523 TTC37Q6PGP7 1564 aa30.26■■■□□ 2.43
XPA-202ENST00000462523 EHBP1L1Q8N3D4 1523 aa30.25■■■□□ 2.43
XPA-202ENST00000462523 LRRC9Q6ZRR7 1453 aa30.24■■■□□ 2.43
XPA-202ENST00000462523 MTUS2Q5JR59 1369 aa30.24■■■□□ 2.43
XPA-202ENST00000462523 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
XPA-202ENST00000462523 PPRC1Q5VV67 1664 aaKnown RBP30.22■■■□□ 2.43
XPA-202ENST00000462523 TSPOAP1O95153 1857 aa30.21■■■□□ 2.43
XPA-202ENST00000462523 CD109Q6YHK3 1445 aa30.17■■■□□ 2.42
XPA-202ENST00000462523 APLP2Q06481 763 aa30.16■■■□□ 2.42
XPA-202ENST00000462523 SUPT6HQ7KZ85 1726 aaKnown RBP30.12■■■□□ 2.41
XPA-202ENST00000462523 MYO5CQ9NQX4 1742 aa30.1■■■□□ 2.41
XPA-202ENST00000462523 CDC42BPAQ5VT25 1732 aa30.08■■■□□ 2.41
XPA-202ENST00000462523 NCOA2Q15596 1464 aa30.08■■■□□ 2.41
XPA-202ENST00000462523 PLCH2O75038 1416 aa30.05■■■□□ 2.4
XPA-202ENST00000462523 PREX2Q70Z35 1606 aa30.05■■■□□ 2.4
XPA-202ENST00000462523 CDC42BPBQ9Y5S2 1711 aa30.05■■■□□ 2.4
XPA-202ENST00000462523 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
XPA-202ENST00000462523 ARAP3Q8WWN8 1544 aa30.02■■■□□ 2.4
XPA-202ENST00000462523 TEX14Q8IWB6 1497 aa30.01■■■□□ 2.4
XPA-202ENST00000462523 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
XPA-202ENST00000462523 FANCAO15360 1455 aa29.97■■■□□ 2.39
XPA-202ENST00000462523 PPARGC1BQ86YN6 1023 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms