RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 SHROOM2Q13796 1616 aa19.52■□□□□ 0.71
RAE1-207ENST00000462438 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
RAE1-207ENST00000462438 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
RAE1-207ENST00000462438 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
RAE1-207ENST00000462438 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
RAE1-207ENST00000462438 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
RAE1-207ENST00000462438 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
RAE1-207ENST00000462438 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
RAE1-207ENST00000462438 KIAA0556O60303 1618 aa19.35■□□□□ 0.69
RAE1-207ENST00000462438 CLIP1P30622 1438 aa19.34■□□□□ 0.69
RAE1-207ENST00000462438 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.69
RAE1-207ENST00000462438 DISP1Q96F81 1524 aa19.32■□□□□ 0.68
RAE1-207ENST00000462438 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
RAE1-207ENST00000462438 FBLN2P98095 1184 aa19.29■□□□□ 0.68
RAE1-207ENST00000462438 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
RAE1-207ENST00000462438 CARMIL2Q6F5E8 1435 aa19.27■□□□□ 0.68
RAE1-207ENST00000462438 ARAP1Q96P48 1450 aa19.27■□□□□ 0.68
RAE1-207ENST00000462438 JPH4Q96JJ6 628 aa19.24■□□□□ 0.67
RAE1-207ENST00000462438 FMN1Q68DA7 1419 aa19.21■□□□□ 0.67
RAE1-207ENST00000462438 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
RAE1-207ENST00000462438 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
RAE1-207ENST00000462438 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
RAE1-207ENST00000462438 MAP3K1Q13233 1512 aa19.15■□□□□ 0.66
RAE1-207ENST00000462438 ABCA8O94911 1581 aa19.13■□□□□ 0.65
RAE1-207ENST00000462438 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
RAE1-207ENST00000462438 FHOD3Q2V2M9 1422 aa19.13■□□□□ 0.65
RAE1-207ENST00000462438 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
RAE1-207ENST00000462438 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
RAE1-207ENST00000462438 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
RAE1-207ENST00000462438 RAPGEF6Q8TEU7 1601 aa19.1■□□□□ 0.65
RAE1-207ENST00000462438 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
RAE1-207ENST00000462438 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
RAE1-207ENST00000462438 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
RAE1-207ENST00000462438 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
RAE1-207ENST00000462438 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
RAE1-207ENST00000462438 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
RAE1-207ENST00000462438 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
RAE1-207ENST00000462438 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
RAE1-207ENST00000462438 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
RAE1-207ENST00000462438 PTPRGP23470 1445 aa19.04■□□□□ 0.64
RAE1-207ENST00000462438 ABCC2Q92887 1545 aa19.03■□□□□ 0.64
RAE1-207ENST00000462438 LRRIQ1Q96JM4 1722 aa19.01■□□□□ 0.63
RAE1-207ENST00000462438 UACAQ9BZF9 1416 aa19■□□□□ 0.63
RAE1-207ENST00000462438 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
RAE1-207ENST00000462438 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
RAE1-207ENST00000462438 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
RAE1-207ENST00000462438 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
RAE1-207ENST00000462438 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
RAE1-207ENST00000462438 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
RAE1-207ENST00000462438 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
RAE1-207ENST00000462438 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
RAE1-207ENST00000462438 ZCCHC11Q5TAX3 1644 aaKnown RBP18.88■□□□□ 0.61
RAE1-207ENST00000462438 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
RAE1-207ENST00000462438 ATP10BO94823 1461 aa18.86■□□□□ 0.61
RAE1-207ENST00000462438 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
RAE1-207ENST00000462438 HRCP23327 699 aa18.83■□□□□ 0.61
RAE1-207ENST00000462438 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
RAE1-207ENST00000462438 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
RAE1-207ENST00000462438 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
RAE1-207ENST00000462438 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
RAE1-207ENST00000462438 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
RAE1-207ENST00000462438 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
RAE1-207ENST00000462438 APLP2Q06481 763 aa18.76■□□□□ 0.59
RAE1-207ENST00000462438 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
RAE1-207ENST00000462438 KIF14Q15058 1648 aa18.74■□□□□ 0.59
RAE1-207ENST00000462438 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
RAE1-207ENST00000462438 GLI2P10070 1586 aa18.69■□□□□ 0.58
RAE1-207ENST00000462438 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
RAE1-207ENST00000462438 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
RAE1-207ENST00000462438 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
RAE1-207ENST00000462438 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
RAE1-207ENST00000462438 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
RAE1-207ENST00000462438 MYT1Q01538 1121 aa18.68■□□□□ 0.58
RAE1-207ENST00000462438 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
RAE1-207ENST00000462438 ASXL2Q76L83 1435 aa18.65■□□□□ 0.58
RAE1-207ENST00000462438 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
RAE1-207ENST00000462438 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
RAE1-207ENST00000462438 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
RAE1-207ENST00000462438 PREX2Q70Z35 1606 aa18.62■□□□□ 0.57
RAE1-207ENST00000462438 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
RAE1-207ENST00000462438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.61■□□□□ 0.57
RAE1-207ENST00000462438 CDC42BPAQ5VT25 1732 aa18.61■□□□□ 0.57
RAE1-207ENST00000462438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
RAE1-207ENST00000462438 MYO5CQ9NQX4 1742 aa18.61■□□□□ 0.57
RAE1-207ENST00000462438 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
RAE1-207ENST00000462438 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
RAE1-207ENST00000462438 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
RAE1-207ENST00000462438 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
RAE1-207ENST00000462438 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
RAE1-207ENST00000462438 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
RAE1-207ENST00000462438 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.57
RAE1-207ENST00000462438 DIP2BQ9P265 1576 aa18.58■□□□□ 0.57
RAE1-207ENST00000462438 MAP3K4Q9Y6R4 1608 aa18.58■□□□□ 0.56
RAE1-207ENST00000462438 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
RAE1-207ENST00000462438 CFAP74Q9C0B2 1584 aa18.56■□□□□ 0.56
RAE1-207ENST00000462438 GPATCH8Q9UKJ3 1502 aaKnown RBP18.55■□□□□ 0.56
RAE1-207ENST00000462438 CDC42BPBQ9Y5S2 1711 aa18.55■□□□□ 0.56
RAE1-207ENST00000462438 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
RAE1-207ENST00000462438 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
RAE1-207ENST00000462438 KIF13AQ9H1H9 1805 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms