RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
SRRM1-204ENST00000461768 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
SRRM1-204ENST00000461768 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
SRRM1-204ENST00000461768 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
SRRM1-204ENST00000461768 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.17
SRRM1-204ENST00000461768 KIF21BO75037 1637 aa14.01□□□□□ -0.17
SRRM1-204ENST00000461768 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
SRRM1-204ENST00000461768 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
SRRM1-204ENST00000461768 CTTNBP2Q8WZ74 1663 aa13.98□□□□□ -0.17
SRRM1-204ENST00000461768 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.17
SRRM1-204ENST00000461768 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
SRRM1-204ENST00000461768 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
SRRM1-204ENST00000461768 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
SRRM1-204ENST00000461768 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
SRRM1-204ENST00000461768 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
SRRM1-204ENST00000461768 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
SRRM1-204ENST00000461768 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
SRRM1-204ENST00000461768 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
SRRM1-204ENST00000461768 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
SRRM1-204ENST00000461768 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
SRRM1-204ENST00000461768 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
SRRM1-204ENST00000461768 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
SRRM1-204ENST00000461768 PTPRGP23470 1445 aa13.8□□□□□ -0.2
SRRM1-204ENST00000461768 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
SRRM1-204ENST00000461768 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-204ENST00000461768 ADCY10Q96PN6 1610 aa13.74□□□□□ -0.21
SRRM1-204ENST00000461768 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-204ENST00000461768 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
SRRM1-204ENST00000461768 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
SRRM1-204ENST00000461768 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
SRRM1-204ENST00000461768 UACAQ9BZF9 1416 aa13.72□□□□□ -0.21
SRRM1-204ENST00000461768 UHRF1BP1LA0JNW5 1464 aa13.71□□□□□ -0.21
SRRM1-204ENST00000461768 ABCA8O94911 1581 aa13.71□□□□□ -0.22
SRRM1-204ENST00000461768 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
SRRM1-204ENST00000461768 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
SRRM1-204ENST00000461768 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
SRRM1-204ENST00000461768 CLIP1P30622 1438 aa13.66□□□□□ -0.22
SRRM1-204ENST00000461768 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
SRRM1-204ENST00000461768 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
SRRM1-204ENST00000461768 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRRM1-204ENST00000461768 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
SRRM1-204ENST00000461768 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
SRRM1-204ENST00000461768 FMN1Q68DA7 1419 aa13.63□□□□□ -0.23
SRRM1-204ENST00000461768 ZCCHC11Q5TAX3 1644 aaKnown RBP13.62□□□□□ -0.23
SRRM1-204ENST00000461768 NUP153P49790 1475 aaKnown RBP13.61□□□□□ -0.23
SRRM1-204ENST00000461768 ATP10BO94823 1461 aa13.57□□□□□ -0.24
SRRM1-204ENST00000461768 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
SRRM1-204ENST00000461768 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
SRRM1-204ENST00000461768 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
SRRM1-204ENST00000461768 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
SRRM1-204ENST00000461768 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
SRRM1-204ENST00000461768 ARID3CA6NKF2 412 aa13.54□□□□□ -0.24
SRRM1-204ENST00000461768 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
SRRM1-204ENST00000461768 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-204ENST00000461768 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
SRRM1-204ENST00000461768 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
SRRM1-204ENST00000461768 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
SRRM1-204ENST00000461768 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
SRRM1-204ENST00000461768 LRRIQ1Q96JM4 1722 aa13.51□□□□□ -0.25
SRRM1-204ENST00000461768 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
SRRM1-204ENST00000461768 GLI2P10070 1586 aa13.49□□□□□ -0.25
SRRM1-204ENST00000461768 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
SRRM1-204ENST00000461768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
SRRM1-204ENST00000461768 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
SRRM1-204ENST00000461768 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
SRRM1-204ENST00000461768 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
SRRM1-204ENST00000461768 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
SRRM1-204ENST00000461768 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
SRRM1-204ENST00000461768 MAP3K4Q9Y6R4 1608 aa13.43□□□□□ -0.26
SRRM1-204ENST00000461768 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
SRRM1-204ENST00000461768 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-204ENST00000461768 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
SRRM1-204ENST00000461768 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
SRRM1-204ENST00000461768 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
SRRM1-204ENST00000461768 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
SRRM1-204ENST00000461768 PPRC1Q5VV67 1664 aaKnown RBP13.39□□□□□ -0.27
SRRM1-204ENST00000461768 TSPOAP1O95153 1857 aa13.39□□□□□ -0.27
SRRM1-204ENST00000461768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRRM1-204ENST00000461768 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
SRRM1-204ENST00000461768 KIF14Q15058 1648 aa13.37□□□□□ -0.27
SRRM1-204ENST00000461768 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
SRRM1-204ENST00000461768 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
SRRM1-204ENST00000461768 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
SRRM1-204ENST00000461768 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
SRRM1-204ENST00000461768 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
SRRM1-204ENST00000461768 MTUS2Q5JR59 1369 aa13.32□□□□□ -0.28
SRRM1-204ENST00000461768 MYO5CQ9NQX4 1742 aa13.3□□□□□ -0.28
SRRM1-204ENST00000461768 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
SRRM1-204ENST00000461768 PLCH2O75038 1416 aa13.3□□□□□ -0.28
SRRM1-204ENST00000461768 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
SRRM1-204ENST00000461768 NEO1Q92859 1461 aa13.28□□□□□ -0.28
SRRM1-204ENST00000461768 APLP2Q06481 763 aa13.27□□□□□ -0.29
SRRM1-204ENST00000461768 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.29
SRRM1-204ENST00000461768 KDM6BO15054 1643 aa13.27□□□□□ -0.29
SRRM1-204ENST00000461768 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
SRRM1-204ENST00000461768 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
SRRM1-204ENST00000461768 FANCAO15360 1455 aa13.26□□□□□ -0.29
SRRM1-204ENST00000461768 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
SRRM1-204ENST00000461768 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
SRRM1-204ENST00000461768 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms