RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PRDM2Q13029 1718 aa8.15□□□□□ -1.11
ECHDC1-211ENST00000460558 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
ECHDC1-211ENST00000460558 SPINK5Q9NQ38 1064 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-211ENST00000460558 MROH2BQ7Z745 1585 aa8.12□□□□□ -1.11
ECHDC1-211ENST00000460558 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
ECHDC1-211ENST00000460558 CFTRP13569 1480 aa8.11□□□□□ -1.11
ECHDC1-211ENST00000460558 FBLN2P98095 1184 aa8.09□□□□□ -1.11
ECHDC1-211ENST00000460558 KIF13AQ9H1H9 1805 aa8.08□□□□□ -1.12
ECHDC1-211ENST00000460558 C1QBPQ07021 282 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-211ENST00000460558 POLA2Q14181 598 aa8.07□□□□□ -1.12
ECHDC1-211ENST00000460558 CLASP1Q7Z460 1538 aa8.07□□□□□ -1.12
ECHDC1-211ENST00000460558 SYNJ1O43426 1573 aa8.05□□□□□ -1.12
ECHDC1-211ENST00000460558 ERCC6L2Q5T890 1561 aa8.05□□□□□ -1.12
ECHDC1-211ENST00000460558 WIZO95785 1651 aa8.04□□□□□ -1.12
ECHDC1-211ENST00000460558 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
ECHDC1-211ENST00000460558 AQRO60306 1485 aaKnown RBP eCLIP8.02□□□□□ -1.13
ECHDC1-211ENST00000460558 GAPVD1Q14C86 1478 aa8.02□□□□□ -1.13
ECHDC1-211ENST00000460558 KDM4FA0A1W2PPD8 638 aa8.02□□□□□ -1.13
ECHDC1-211ENST00000460558 TARBP1Q13395 1621 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-211ENST00000460558 CAPN15O75808 1086 aa8.01□□□□□ -1.13
ECHDC1-211ENST00000460558 VASPP50552 380 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-211ENST00000460558 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
ECHDC1-211ENST00000460558 ABCC8Q09428 1581 aa8□□□□□ -1.13
ECHDC1-211ENST00000460558 HECW2Q9P2P5 1572 aa7.98□□□□□ -1.13
ECHDC1-211ENST00000460558 FBXO41Q8TF61 875 aa7.98□□□□□ -1.13
ECHDC1-211ENST00000460558 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
ECHDC1-211ENST00000460558 LMTK3Q96Q04 1460 aa7.97□□□□□ -1.13
ECHDC1-211ENST00000460558 KDM6BO15054 1643 aa7.96□□□□□ -1.13
ECHDC1-211ENST00000460558 SNAPC4Q5SXM2 1469 aa7.94□□□□□ -1.14
ECHDC1-211ENST00000460558 IFNLR1Q8IU57 520 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-211ENST00000460558 CHMP7Q8WUX9 453 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-211ENST00000460558 MAGI1Q96QZ7 1491 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-211ENST00000460558 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
ECHDC1-211ENST00000460558 TSPOAP1O95153 1857 aa7.92□□□□□ -1.14
ECHDC1-211ENST00000460558 SYNJ2O15056 1496 aa7.9□□□□□ -1.14
ECHDC1-211ENST00000460558 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-211ENST00000460558 SOCS7O14512 581 aa7.9□□□□□ -1.14
ECHDC1-211ENST00000460558 ABCB7O75027 752 aa7.9□□□□□ -1.14
ECHDC1-211ENST00000460558 TOP2AP11388 1531 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-211ENST00000460558 DSG3P32926 999 aa7.89□□□□□ -1.15
ECHDC1-211ENST00000460558 ADGRL1O94910 1474 aa7.88□□□□□ -1.15
ECHDC1-211ENST00000460558 TDRD9Q8NDG6 1382 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-211ENST00000460558 PBRM1Q86U86 1689 aa7.87□□□□□ -1.15
ECHDC1-211ENST00000460558 ABCC10Q5T3U5 1492 aa7.87□□□□□ -1.15
ECHDC1-211ENST00000460558 DIP2BQ9P265 1576 aa7.86□□□□□ -1.15
ECHDC1-211ENST00000460558 FAM69CQ0P6D2 419 aa7.86□□□□□ -1.15
ECHDC1-211ENST00000460558 GRIN2BQ13224 1484 aa7.86□□□□□ -1.15
ECHDC1-211ENST00000460558 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
ECHDC1-211ENST00000460558 SSUH2Q9Y2M2 353 aa7.85□□□□□ -1.15
ECHDC1-211ENST00000460558 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
ECHDC1-211ENST00000460558 PKD2Q13563 968 aa7.84□□□□□ -1.15
ECHDC1-211ENST00000460558 SOGA1O94964 1423 aa7.84□□□□□ -1.15
ECHDC1-211ENST00000460558 MAPKBP1O60336 1514 aa7.83□□□□□ -1.16
ECHDC1-211ENST00000460558 SPDYE2BA6NHP3 402 aa7.82□□□□□ -1.16
ECHDC1-211ENST00000460558 SPDYE6P0CI01 402 aa7.82□□□□□ -1.16
ECHDC1-211ENST00000460558 SPDYE2Q495Y8 402 aa7.82□□□□□ -1.16
ECHDC1-211ENST00000460558 SHROOM2Q13796 1616 aa7.81□□□□□ -1.16
ECHDC1-211ENST00000460558 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
ECHDC1-211ENST00000460558 ILDR2Q71H61 639 aa7.8□□□□□ -1.16
ECHDC1-211ENST00000460558 ZNF692Q9BU19 519 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-211ENST00000460558 STAG3Q9UJ98 1225 aa7.79□□□□□ -1.16
ECHDC1-211ENST00000460558 DISP3Q9P2K9 1392 aa7.79□□□□□ -1.16
ECHDC1-211ENST00000460558 NPM1P06748 294 aaKnown RBP eCLIP7.78□□□□□ -1.16
ECHDC1-211ENST00000460558 FGD5Q6ZNL6 1462 aa7.77□□□□□ -1.17
ECHDC1-211ENST00000460558 TOP2BQ02880 1626 aa7.77□□□□□ -1.17
ECHDC1-211ENST00000460558 CCDC88BA6NC98 1476 aa7.76□□□□□ -1.17
ECHDC1-211ENST00000460558 GRIN2AQ12879 1464 aa7.75□□□□□ -1.17
ECHDC1-211ENST00000460558 SPOCK2Q92563 424 aa7.75□□□□□ -1.17
ECHDC1-211ENST00000460558 NUP160Q12769 1436 aa7.74□□□□□ -1.17
ECHDC1-211ENST00000460558 ADCY10Q96PN6 1610 aa7.74□□□□□ -1.17
ECHDC1-211ENST00000460558 CACNB1Q02641 598 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-211ENST00000460558 ABCA5Q8WWZ7 1642 aa7.73□□□□□ -1.17
ECHDC1-211ENST00000460558 PPRC1Q5VV67 1664 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-211ENST00000460558 SPATA31D1Q6ZQQ2 1576 aa7.72□□□□□ -1.17
ECHDC1-211ENST00000460558 ADAMTS12P58397 1594 aa7.71□□□□□ -1.18
ECHDC1-211ENST00000460558 PRG4Q92954 1404 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-211ENST00000460558 CUX1P39880 1505 aa7.68□□□□□ -1.18
ECHDC1-211ENST00000460558 KLHL34Q8N239 644 aa7.67□□□□□ -1.18
ECHDC1-211ENST00000460558 ABCA10Q8WWZ4 1543 aa7.66□□□□□ -1.18
ECHDC1-211ENST00000460558 GLI2P10070 1586 aa7.66□□□□□ -1.18
ECHDC1-211ENST00000460558 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
ECHDC1-211ENST00000460558 ECM2O94769 699 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-211ENST00000460558 TEX14Q8IWB6 1497 aa7.63□□□□□ -1.19
ECHDC1-211ENST00000460558 COL17A1Q9UMD9 1497 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-211ENST00000460558 JPH4Q96JJ6 628 aa7.63□□□□□ -1.19
ECHDC1-211ENST00000460558 PCF11O94913 1555 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-211ENST00000460558 FHAD1B1AJZ9 1412 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 MIER1Q8N108 512 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 CERKQ8TCT0 537 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 BBXQ8WY36 941 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 KIF21BO75037 1637 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 MAP3K4Q9Y6R4 1608 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
ECHDC1-211ENST00000460558 RGL2O15211 777 aa7.6□□□□□ -1.19
ECHDC1-211ENST00000460558 ZBTB47Q9UFB7 747 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-211ENST00000460558 PLB1Q6P1J6 1458 aa7.6□□□□□ -1.19
ECHDC1-211ENST00000460558 CUL7Q14999 1698 aa7.6□□□□□ -1.19
ECHDC1-211ENST00000460558 HAP1P54257 671 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-211ENST00000460558 VSIG10Q8N0Z9 540 aa7.59□□□□□ -1.19
ECHDC1-211ENST00000460558 PTPRMP28827 1452 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms