RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
HLA-DQB1-207ENST00000460185 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.43
HLA-DQB1-207ENST00000460185 ADAMTS12P58397 1594 aa17.76■□□□□ 0.43
HLA-DQB1-207ENST00000460185 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-207ENST00000460185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
HLA-DQB1-207ENST00000460185 FBLN2P98095 1184 aa17.72■□□□□ 0.43
HLA-DQB1-207ENST00000460185 CUL7Q14999 1698 aa17.69■□□□□ 0.42
HLA-DQB1-207ENST00000460185 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-207ENST00000460185 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
HLA-DQB1-207ENST00000460185 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
HLA-DQB1-207ENST00000460185 GRIN2AQ12879 1464 aa17.65■□□□□ 0.42
HLA-DQB1-207ENST00000460185 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
HLA-DQB1-207ENST00000460185 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
HLA-DQB1-207ENST00000460185 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
HLA-DQB1-207ENST00000460185 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
HLA-DQB1-207ENST00000460185 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
HLA-DQB1-207ENST00000460185 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
HLA-DQB1-207ENST00000460185 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
HLA-DQB1-207ENST00000460185 NUP160Q12769 1436 aa17.54■□□□□ 0.4
HLA-DQB1-207ENST00000460185 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
HLA-DQB1-207ENST00000460185 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
HLA-DQB1-207ENST00000460185 IGF1RP08069 1367 aa17.49■□□□□ 0.39
HLA-DQB1-207ENST00000460185 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
HLA-DQB1-207ENST00000460185 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
HLA-DQB1-207ENST00000460185 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
HLA-DQB1-207ENST00000460185 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
HLA-DQB1-207ENST00000460185 EEA1Q15075 1411 aa17.39■□□□□ 0.38
HLA-DQB1-207ENST00000460185 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
HLA-DQB1-207ENST00000460185 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
HLA-DQB1-207ENST00000460185 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
HLA-DQB1-207ENST00000460185 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
HLA-DQB1-207ENST00000460185 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-207ENST00000460185 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
HLA-DQB1-207ENST00000460185 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
HLA-DQB1-207ENST00000460185 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
HLA-DQB1-207ENST00000460185 KIF21BO75037 1637 aa17.25■□□□□ 0.35
HLA-DQB1-207ENST00000460185 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
HLA-DQB1-207ENST00000460185 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
HLA-DQB1-207ENST00000460185 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
HLA-DQB1-207ENST00000460185 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
HLA-DQB1-207ENST00000460185 KIAA0556O60303 1618 aa17.2■□□□□ 0.34
HLA-DQB1-207ENST00000460185 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
HLA-DQB1-207ENST00000460185 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB1-207ENST00000460185 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
HLA-DQB1-207ENST00000460185 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
HLA-DQB1-207ENST00000460185 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
HLA-DQB1-207ENST00000460185 PTPRGP23470 1445 aa17.1■□□□□ 0.33
HLA-DQB1-207ENST00000460185 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
HLA-DQB1-207ENST00000460185 CAPN15O75808 1086 aa17.07■□□□□ 0.32
HLA-DQB1-207ENST00000460185 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
HLA-DQB1-207ENST00000460185 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
HLA-DQB1-207ENST00000460185 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
HLA-DQB1-207ENST00000460185 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
HLA-DQB1-207ENST00000460185 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
HLA-DQB1-207ENST00000460185 UHRF1BP1LA0JNW5 1464 aa17.02■□□□□ 0.32
HLA-DQB1-207ENST00000460185 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-207ENST00000460185 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-207ENST00000460185 UACAQ9BZF9 1416 aa17■□□□□ 0.31
HLA-DQB1-207ENST00000460185 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
HLA-DQB1-207ENST00000460185 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-207ENST00000460185 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-207ENST00000460185 ABCA8O94911 1581 aa16.96■□□□□ 0.31
HLA-DQB1-207ENST00000460185 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
HLA-DQB1-207ENST00000460185 RAPGEF6Q8TEU7 1601 aa16.93■□□□□ 0.3
HLA-DQB1-207ENST00000460185 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
HLA-DQB1-207ENST00000460185 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
HLA-DQB1-207ENST00000460185 DSG3P32926 999 aa16.91■□□□□ 0.3
HLA-DQB1-207ENST00000460185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-207ENST00000460185 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-207ENST00000460185 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
HLA-DQB1-207ENST00000460185 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
HLA-DQB1-207ENST00000460185 APLP2Q06481 763 aa16.89■□□□□ 0.29
HLA-DQB1-207ENST00000460185 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
HLA-DQB1-207ENST00000460185 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-207ENST00000460185 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-207ENST00000460185 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
HLA-DQB1-207ENST00000460185 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
HLA-DQB1-207ENST00000460185 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
HLA-DQB1-207ENST00000460185 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
HLA-DQB1-207ENST00000460185 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
HLA-DQB1-207ENST00000460185 GLI2P10070 1586 aa16.82■□□□□ 0.28
HLA-DQB1-207ENST00000460185 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
HLA-DQB1-207ENST00000460185 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
HLA-DQB1-207ENST00000460185 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-207ENST00000460185 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
HLA-DQB1-207ENST00000460185 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
HLA-DQB1-207ENST00000460185 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
HLA-DQB1-207ENST00000460185 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-207ENST00000460185 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-207ENST00000460185 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-207ENST00000460185 ATP10BO94823 1461 aa16.74■□□□□ 0.27
HLA-DQB1-207ENST00000460185 CLIP1P30622 1438 aa16.74■□□□□ 0.27
HLA-DQB1-207ENST00000460185 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-207ENST00000460185 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-207ENST00000460185 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-207ENST00000460185 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
HLA-DQB1-207ENST00000460185 KDM6BO15054 1643 aa16.7■□□□□ 0.26
HLA-DQB1-207ENST00000460185 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
HLA-DQB1-207ENST00000460185 ABCA9Q8IUA7 1624 aa16.69■□□□□ 0.26
HLA-DQB1-207ENST00000460185 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms