RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.94
UBQLN4-202ENST00000459954 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
UBQLN4-202ENST00000459954 KIF27Q86VH2 1401 aa9.15□□□□□ -0.94
UBQLN4-202ENST00000459954 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
UBQLN4-202ENST00000459954 APLP2Q06481 763 aa9.14□□□□□ -0.95
UBQLN4-202ENST00000459954 DNAJC5Q9H3Z4 198 aa9.14□□□□□ -0.95
UBQLN4-202ENST00000459954 ZNF608Q9ULD9 1512 aaPredicted RBP9.14□□□□□ -0.95
UBQLN4-202ENST00000459954 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.955e-8■■■□□ 15.3
UBQLN4-202ENST00000459954 MAP3K1Q13233 1512 aa9.12□□□□□ -0.95
UBQLN4-202ENST00000459954 CHMP7Q8WUX9 453 aaPredicted RBP9.12□□□□□ -0.95
UBQLN4-202ENST00000459954 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
UBQLN4-202ENST00000459954 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
UBQLN4-202ENST00000459954 SYNJ2O15056 1496 aa9.09□□□□□ -0.95
UBQLN4-202ENST00000459954 FHAD1B1AJZ9 1412 aa9.09□□□□□ -0.95
UBQLN4-202ENST00000459954 RRBP1Q9P2E9 1410 aaKnown RBP9.09□□□□□ -0.95
UBQLN4-202ENST00000459954 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
UBQLN4-202ENST00000459954 IGF1RP08069 1367 aa9.08□□□□□ -0.96
UBQLN4-202ENST00000459954 ABCA5Q8WWZ7 1642 aa9.08□□□□□ -0.96
UBQLN4-202ENST00000459954 SNAPC4Q5SXM2 1469 aa9.05□□□□□ -0.96
UBQLN4-202ENST00000459954 FBLN2P98095 1184 aa9.05□□□□□ -0.96
UBQLN4-202ENST00000459954 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
UBQLN4-202ENST00000459954 ARHGAP35Q9NRY4 1499 aa9.02□□□□□ -0.96
UBQLN4-202ENST00000459954 HNRNPUL2Q1KMD3 747 aaKnown RBP9.02□□□□□ -0.97
UBQLN4-202ENST00000459954 TTBK1Q5TCY1 1321 aaPredicted RBP9.02□□□□□ -0.97
UBQLN4-202ENST00000459954 DHX57Q6P158 1386 aaKnown RBP9.01□□□□□ -0.97
UBQLN4-202ENST00000459954 CFAP43Q8NDM7 1665 aa9.01□□□□□ -0.97
UBQLN4-202ENST00000459954 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
UBQLN4-202ENST00000459954 CUL7Q14999 1698 aa9□□□□□ -0.97
UBQLN4-202ENST00000459954 TIAM1Q13009 1591 aa9□□□□□ -0.97
UBQLN4-202ENST00000459954 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
UBQLN4-202ENST00000459954 PBRM1Q86U86 1689 aa9□□□□□ -0.97
UBQLN4-202ENST00000459954 NUP160Q12769 1436 aa8.99□□□□□ -0.97
UBQLN4-202ENST00000459954 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
UBQLN4-202ENST00000459954 CCNB3Q8WWL7 1395 aa8.98□□□□□ -0.97
UBQLN4-202ENST00000459954 CTTNBP2Q8WZ74 1663 aa8.97□□□□□ -0.97
UBQLN4-202ENST00000459954 KIAA0586Q9BVV6 1533 aa8.96□□□□□ -0.97
UBQLN4-202ENST00000459954 MYT1Q01538 1121 aa8.96□□□□□ -0.98
UBQLN4-202ENST00000459954 EFCAB5A4FU69 1503 aa8.95□□□□□ -0.98
UBQLN4-202ENST00000459954 JPH4Q96JJ6 628 aa8.95□□□□□ -0.98
UBQLN4-202ENST00000459954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBQLN4-202ENST00000459954 MIER1Q8N108 512 aa8.94□□□□□ -0.98
UBQLN4-202ENST00000459954 KANK4Q5T7N3 995 aaPredicted RBP8.93□□□□□ -0.98
UBQLN4-202ENST00000459954 CLASP1Q7Z460 1538 aa8.93□□□□□ -0.98
UBQLN4-202ENST00000459954 CHD1O14646 1710 aa8.92□□□□□ -0.98
UBQLN4-202ENST00000459954 LRRC9Q6ZRR7 1453 aa8.92□□□□□ -0.98
UBQLN4-202ENST00000459954 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
UBQLN4-202ENST00000459954 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
UBQLN4-202ENST00000459954 CARMIL2Q6F5E8 1435 aa8.9□□□□□ -0.98
UBQLN4-202ENST00000459954 SETD5Q9C0A6 1442 aa8.88□□□□□ -0.99
UBQLN4-202ENST00000459954 PCF11O94913 1555 aaKnown RBP8.88□□□□□ -0.99
UBQLN4-202ENST00000459954 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
UBQLN4-202ENST00000459954 MAPKBP1O60336 1514 aa8.88□□□□□ -0.99
UBQLN4-202ENST00000459954 CEP170Q5SW79 1584 aa8.87□□□□□ -0.99
UBQLN4-202ENST00000459954 CASKIN1Q8WXD9 1431 aa8.87□□□□□ -0.99
UBQLN4-202ENST00000459954 SHROOM2Q13796 1616 aa8.86□□□□□ -0.99
UBQLN4-202ENST00000459954 PRG4Q92954 1404 aaPredicted RBP8.86□□□□□ -0.99
UBQLN4-202ENST00000459954 RAB3GAP2Q9H2M9 1393 aa8.86□□□□□ -0.99
UBQLN4-202ENST00000459954 IQGAP2Q13576 1575 aa8.85□□□□□ -0.99
UBQLN4-202ENST00000459954 SAMD9Q5K651 1589 aa8.85□□□□□ -0.99
UBQLN4-202ENST00000459954 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
UBQLN4-202ENST00000459954 FMN1Q68DA7 1419 aa8.84□□□□□ -0.99
UBQLN4-202ENST00000459954 CYB5RLQ6IPT4 315 aa8.84□□□□□ -0.99
UBQLN4-202ENST00000459954 UGGT2Q9NYU1 1516 aa8.84□□□□□ -0.99
UBQLN4-202ENST00000459954 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
UBQLN4-202ENST00000459954 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
UBQLN4-202ENST00000459954 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
UBQLN4-202ENST00000459954 PTPRGP23470 1445 aa8.81□□□□□ -1
UBQLN4-202ENST00000459954 SUPT6HQ7KZ85 1726 aaKnown RBP8.81□□□□□ -1
UBQLN4-202ENST00000459954 LRRIQ1Q96JM4 1722 aa8.81□□□□□ -1
UBQLN4-202ENST00000459954 NPM1P06748 294 aaKnown RBP eCLIP8.81□□□□□ -1
UBQLN4-202ENST00000459954 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
UBQLN4-202ENST00000459954 YTHDC1Q96MU7 727 aaKnown RBP8.79□□□□□ -1
UBQLN4-202ENST00000459954 GCC2Q8IWJ2 1684 aa8.77□□□□□ -1.01
UBQLN4-202ENST00000459954 FGD6Q6ZV73 1430 aa8.77□□□□□ -1.01
UBQLN4-202ENST00000459954 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
UBQLN4-202ENST00000459954 DISP1Q96F81 1524 aa8.76□□□□□ -1.01
UBQLN4-202ENST00000459954 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
UBQLN4-202ENST00000459954 UHRF1BP1LA0JNW5 1464 aa8.76□□□□□ -1.01
UBQLN4-202ENST00000459954 PTPN23Q9H3S7 1636 aa8.76□□□□□ -1.01
UBQLN4-202ENST00000459954 HFM1A2PYH4 1435 aa8.75□□□□□ -1.01
UBQLN4-202ENST00000459954 FHOD3Q2V2M9 1422 aa8.75□□□□□ -1.01
UBQLN4-202ENST00000459954 CCDC18Q5T9S5 1454 aa8.75□□□□□ -1.01
UBQLN4-202ENST00000459954 UACAQ9BZF9 1416 aa8.74□□□□□ -1.01
UBQLN4-202ENST00000459954 AKNAQ7Z591 1439 aa8.73□□□□□ -1.01
UBQLN4-202ENST00000459954 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
UBQLN4-202ENST00000459954 CCER2I3L3R5 266 aa8.73□□□□□ -1.01
UBQLN4-202ENST00000459954 PPP1R15AO75807 674 aaPredicted RBP8.73□□□□□ -1.01
UBQLN4-202ENST00000459954 FOXD1Q16676 465 aa8.73□□□□□ -1.01
UBQLN4-202ENST00000459954 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
UBQLN4-202ENST00000459954 MYOM3Q5VTT5 1437 aa8.72□□□□□ -1.01
UBQLN4-202ENST00000459954 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
UBQLN4-202ENST00000459954 FAM50AQ14320 339 aaKnown RBP8.71□□□□□ -1.02
UBQLN4-202ENST00000459954 POLR1AO95602 1720 aaPredicted RBP8.71□□□□□ -1.02
UBQLN4-202ENST00000459954 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 ITGAEP38570 1179 aa8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 CDK11AQ9UQ88 783 aaPredicted RBP8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 SUPT16HQ9Y5B9 1047 aaKnown RBP8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 MTUS2Q5JR59 1369 aa8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
UBQLN4-202ENST00000459954 NAIPQ13075 1403 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms