RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
UFD1-205ENST00000459854 IGF1RP08069 1367 aa13.9□□□□□ -0.19
UFD1-205ENST00000459854 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
UFD1-205ENST00000459854 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
UFD1-205ENST00000459854 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
UFD1-205ENST00000459854 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
UFD1-205ENST00000459854 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
UFD1-205ENST00000459854 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
UFD1-205ENST00000459854 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
UFD1-205ENST00000459854 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
UFD1-205ENST00000459854 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
UFD1-205ENST00000459854 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 GLIPR1L2Q4G1C9 344 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 TNIKQ9UKE5 1360 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
UFD1-205ENST00000459854 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
UFD1-205ENST00000459854 CLIP1P30622 1438 aa13.76□□□□□ -0.21
UFD1-205ENST00000459854 CUL7Q14999 1698 aa13.74□□□□□ -0.21
UFD1-205ENST00000459854 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
UFD1-205ENST00000459854 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
UFD1-205ENST00000459854 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
UFD1-205ENST00000459854 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
UFD1-205ENST00000459854 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
UFD1-205ENST00000459854 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
UFD1-205ENST00000459854 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
UFD1-205ENST00000459854 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
UFD1-205ENST00000459854 KIF21BO75037 1637 aa13.66□□□□□ -0.22
UFD1-205ENST00000459854 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
UFD1-205ENST00000459854 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
UFD1-205ENST00000459854 PTPRGP23470 1445 aa13.63□□□□□ -0.23
UFD1-205ENST00000459854 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
UFD1-205ENST00000459854 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
UFD1-205ENST00000459854 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
UFD1-205ENST00000459854 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
UFD1-205ENST00000459854 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
UFD1-205ENST00000459854 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
UFD1-205ENST00000459854 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
UFD1-205ENST00000459854 NUP160Q12769 1436 aa13.52□□□□□ -0.24
UFD1-205ENST00000459854 KCNH8Q96L42 1107 aa13.52□□□□□ -0.25
UFD1-205ENST00000459854 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
UFD1-205ENST00000459854 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
UFD1-205ENST00000459854 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
UFD1-205ENST00000459854 ANP32CO43423 234 aa13.47□□□□□ -0.25
UFD1-205ENST00000459854 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
UFD1-205ENST00000459854 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
UFD1-205ENST00000459854 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
UFD1-205ENST00000459854 CHD1O14646 1710 aa13.42□□□□□ -0.26
UFD1-205ENST00000459854 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
UFD1-205ENST00000459854 ITGAEP38570 1179 aa13.41□□□□□ -0.26
UFD1-205ENST00000459854 UACAQ9BZF9 1416 aa13.41□□□□□ -0.26
UFD1-205ENST00000459854 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 UGGT2Q9NYU1 1516 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
UFD1-205ENST00000459854 BCANQ96GW7 911 aa13.39□□□□□ -0.27
UFD1-205ENST00000459854 CCDC18Q5T9S5 1454 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
UFD1-205ENST00000459854 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
UFD1-205ENST00000459854 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
UFD1-205ENST00000459854 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
UFD1-205ENST00000459854 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
UFD1-205ENST00000459854 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
UFD1-205ENST00000459854 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
UFD1-205ENST00000459854 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 DISP1Q96F81 1524 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.28
UFD1-205ENST00000459854 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.28
UFD1-205ENST00000459854 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
UFD1-205ENST00000459854 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
UFD1-205ENST00000459854 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
UFD1-205ENST00000459854 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
UFD1-205ENST00000459854 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.29
UFD1-205ENST00000459854 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
UFD1-205ENST00000459854 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.3
UFD1-205ENST00000459854 ABCC2Q92887 1545 aa13.21□□□□□ -0.3
UFD1-205ENST00000459854 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
UFD1-205ENST00000459854 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
UFD1-205ENST00000459854 FKBP8Q14318 412 aa13.19□□□□□ -0.3
UFD1-205ENST00000459854 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
UFD1-205ENST00000459854 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
UFD1-205ENST00000459854 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
UFD1-205ENST00000459854 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
UFD1-205ENST00000459854 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
UFD1-205ENST00000459854 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
UFD1-205ENST00000459854 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
UFD1-205ENST00000459854 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms