RNA–Protein interactions for RNA: ENST00000458580.6

EXD1-202, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EXD1, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-202ENST00000458580 MAP3K1Q13233 1512 aa9.73□□□□□ -0.85
EXD1-202ENST00000458580 DHX57Q6P158 1386 aaKnown RBP9.72□□□□□ -0.85
EXD1-202ENST00000458580 FGD5Q6ZNL6 1462 aa9.72□□□□□ -0.85
EXD1-202ENST00000458580 CARMIL1Q5VZK9 1371 aa9.7□□□□□ -0.86
EXD1-202ENST00000458580 CC2D2AQ9P2K1 1620 aa9.69□□□□□ -0.86
EXD1-202ENST00000458580 CCNB3Q8WWL7 1395 aa9.68□□□□□ -0.86
EXD1-202ENST00000458580 TIAM1Q13009 1591 aa9.68□□□□□ -0.86
EXD1-202ENST00000458580 FANCD2Q9BXW9 1451 aa9.67□□□□□ -0.86
EXD1-202ENST00000458580 DNMBPQ6XZF7 1577 aa9.66□□□□□ -0.86
EXD1-202ENST00000458580 ABCA10Q8WWZ4 1543 aa9.65□□□□□ -0.86
EXD1-202ENST00000458580 ANP32EQ9BTT0 268 aa9.64□□□□□ -0.87
EXD1-202ENST00000458580 MIER1Q8N108 512 aa9.64□□□□□ -0.87
EXD1-202ENST00000458580 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
EXD1-202ENST00000458580 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
EXD1-202ENST00000458580 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
EXD1-202ENST00000458580 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
EXD1-202ENST00000458580 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
EXD1-202ENST00000458580 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
EXD1-202ENST00000458580 CUL7Q14999 1698 aa9.6□□□□□ -0.87
EXD1-202ENST00000458580 PCF11O94913 1555 aaKnown RBP9.6□□□□□ -0.87
EXD1-202ENST00000458580 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
EXD1-202ENST00000458580 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
EXD1-202ENST00000458580 PHLDB1Q86UU1 1377 aa9.58□□□□□ -0.88
EXD1-202ENST00000458580 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
EXD1-202ENST00000458580 WDR97A6NE52 1622 aa9.58□□□□□ -0.88
EXD1-202ENST00000458580 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
EXD1-202ENST00000458580 MAPKBP1O60336 1514 aa9.57□□□□□ -0.88
EXD1-202ENST00000458580 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
EXD1-202ENST00000458580 CASKIN1Q8WXD9 1431 aa9.56□□□□□ -0.88
EXD1-202ENST00000458580 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
EXD1-202ENST00000458580 CTTNBP2Q8WZ74 1663 aa9.56□□□□□ -0.88
EXD1-202ENST00000458580 NESP48681 1621 aa9.56□□□□□ -0.88
EXD1-202ENST00000458580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.56□□□□□ -0.88
EXD1-202ENST00000458580 PIAS4Q8N2W9 510 aaPredicted RBP9.56□□□□□ -0.88
EXD1-202ENST00000458580 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
EXD1-202ENST00000458580 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
EXD1-202ENST00000458580 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
EXD1-202ENST00000458580 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
EXD1-202ENST00000458580 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
EXD1-202ENST00000458580 ITGAEP38570 1179 aa9.51□□□□□ -0.89
EXD1-202ENST00000458580 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
EXD1-202ENST00000458580 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
EXD1-202ENST00000458580 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
EXD1-202ENST00000458580 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
EXD1-202ENST00000458580 THOC2Q8NI27 1593 aaKnown RBP9.48□□□□□ -0.89
EXD1-202ENST00000458580 GAPVD1Q14C86 1478 aa9.48□□□□□ -0.89
EXD1-202ENST00000458580 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
EXD1-202ENST00000458580 PDS5BQ9NTI5 1447 aa9.47□□□□□ -0.89
EXD1-202ENST00000458580 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
EXD1-202ENST00000458580 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
EXD1-202ENST00000458580 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
EXD1-202ENST00000458580 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.89
EXD1-202ENST00000458580 TDRD9Q8NDG6 1382 aaKnown RBP9.45□□□□□ -0.9
EXD1-202ENST00000458580 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
EXD1-202ENST00000458580 KIF21AQ7Z4S6 1674 aa9.44□□□□□ -0.9
EXD1-202ENST00000458580 LRRIQ1Q96JM4 1722 aa9.44□□□□□ -0.9
EXD1-202ENST00000458580 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
EXD1-202ENST00000458580 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
EXD1-202ENST00000458580 EHBP1L1Q8N3D4 1523 aa9.42□□□□□ -0.9
EXD1-202ENST00000458580 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
EXD1-202ENST00000458580 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
EXD1-202ENST00000458580 ARHGEF11O15085 1522 aa9.42□□□□□ -0.9
EXD1-202ENST00000458580 NCOA2Q15596 1464 aa9.41□□□□□ -0.9
EXD1-202ENST00000458580 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
EXD1-202ENST00000458580 PTPRKQ15262 1439 aa9.41□□□□□ -0.9
EXD1-202ENST00000458580 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
EXD1-202ENST00000458580 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
EXD1-202ENST00000458580 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
EXD1-202ENST00000458580 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
EXD1-202ENST00000458580 UGGT2Q9NYU1 1516 aa9.4□□□□□ -0.91
EXD1-202ENST00000458580 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
EXD1-202ENST00000458580 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
EXD1-202ENST00000458580 TCOF1Q13428 1488 aaKnown RBP9.38□□□□□ -0.91
EXD1-202ENST00000458580 PBRM1Q86U86 1689 aa9.38□□□□□ -0.91
EXD1-202ENST00000458580 NAIPQ13075 1403 aa9.38□□□□□ -0.91
EXD1-202ENST00000458580 MAGI3Q5TCQ9 1506 aa9.38□□□□□ -0.91
EXD1-202ENST00000458580 ADAMTS12P58397 1594 aa9.37□□□□□ -0.91
EXD1-202ENST00000458580 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
EXD1-202ENST00000458580 IQGAP2Q13576 1575 aa9.36□□□□□ -0.91
EXD1-202ENST00000458580 AKNAQ7Z591 1439 aa9.35□□□□□ -0.91
EXD1-202ENST00000458580 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
EXD1-202ENST00000458580 GCC2Q8IWJ2 1684 aa9.33□□□□□ -0.92
EXD1-202ENST00000458580 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
EXD1-202ENST00000458580 TSHZ2Q9NRE2 1034 aa9.33□□□□□ -0.92
EXD1-202ENST00000458580 WDR62O43379 1518 aa9.33□□□□□ -0.92
EXD1-202ENST00000458580 KDM5BQ9UGL1 1544 aa9.33□□□□□ -0.92
EXD1-202ENST00000458580 EPRSP07814 1512 aaKnown RBP9.33□□□□□ -0.92
EXD1-202ENST00000458580 TONSLQ96HA7 1378 aa9.32□□□□□ -0.92
EXD1-202ENST00000458580 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
EXD1-202ENST00000458580 MIA2Q96PC5 1412 aa9.32□□□□□ -0.92
EXD1-202ENST00000458580 DDX10Q13206 875 aaKnown RBP9.31□□□□□ -0.92
EXD1-202ENST00000458580 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
EXD1-202ENST00000458580 CCER2I3L3R5 266 aa9.3□□□□□ -0.92
EXD1-202ENST00000458580 IFT140Q96RY7 1462 aa9.3□□□□□ -0.92
EXD1-202ENST00000458580 DENND4BO75064 1496 aaPredicted RBP9.29□□□□□ -0.92
EXD1-202ENST00000458580 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
EXD1-202ENST00000458580 CDK13Q14004 1512 aaKnown RBP9.28□□□□□ -0.92
EXD1-202ENST00000458580 KIAA0586Q9BVV6 1533 aa9.27□□□□□ -0.93
EXD1-202ENST00000458580 KIAA0556O60303 1618 aa9.27□□□□□ -0.93
EXD1-202ENST00000458580 KDM6BO15054 1643 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms