RNA–Protein interactions for RNA: ENST00000457958.6

LINC00511-202, long intergenic non-protein coding RNA 511, humanhuman

TSL 1 (best) BASIC

Gene LINC00511, Length 1,696 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-202ENST00000457958 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
LINC00511-202ENST00000457958 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
LINC00511-202ENST00000457958 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
LINC00511-202ENST00000457958 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
LINC00511-202ENST00000457958 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
LINC00511-202ENST00000457958 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
LINC00511-202ENST00000457958 IGF1RP08069 1367 aa19.41■□□□□ 0.7
LINC00511-202ENST00000457958 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
LINC00511-202ENST00000457958 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
LINC00511-202ENST00000457958 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
LINC00511-202ENST00000457958 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
LINC00511-202ENST00000457958 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
LINC00511-202ENST00000457958 APLP2Q06481 763 aa19.34■□□□□ 0.69
LINC00511-202ENST00000457958 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
LINC00511-202ENST00000457958 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
LINC00511-202ENST00000457958 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
LINC00511-202ENST00000457958 CUL7Q14999 1698 aa19.27■□□□□ 0.67
LINC00511-202ENST00000457958 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
LINC00511-202ENST00000457958 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
LINC00511-202ENST00000457958 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
LINC00511-202ENST00000457958 ARHGAP35Q9NRY4 1499 aa19.18■□□□□ 0.66
LINC00511-202ENST00000457958 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
LINC00511-202ENST00000457958 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
LINC00511-202ENST00000457958 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
LINC00511-202ENST00000457958 NUP160Q12769 1436 aa19.1■□□□□ 0.65
LINC00511-202ENST00000457958 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
LINC00511-202ENST00000457958 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
LINC00511-202ENST00000457958 EFCAB5A4FU69 1503 aa19.09■□□□□ 0.65
LINC00511-202ENST00000457958 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
LINC00511-202ENST00000457958 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
LINC00511-202ENST00000457958 CTTNBP2Q8WZ74 1663 aa19.07■□□□□ 0.64
LINC00511-202ENST00000457958 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
LINC00511-202ENST00000457958 ADRA2BP18089 450 aa19.04■□□□□ 0.64
LINC00511-202ENST00000457958 SHROOM2Q13796 1616 aa19.02■□□□□ 0.64
LINC00511-202ENST00000457958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
LINC00511-202ENST00000457958 TIAM1Q13009 1591 aa18.95■□□□□ 0.62
LINC00511-202ENST00000457958 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
LINC00511-202ENST00000457958 FMN1Q68DA7 1419 aa18.93■□□□□ 0.62
LINC00511-202ENST00000457958 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
LINC00511-202ENST00000457958 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
LINC00511-202ENST00000457958 FYCO1Q9BQS8 1478 aa18.92■□□□□ 0.62
LINC00511-202ENST00000457958 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
LINC00511-202ENST00000457958 KIF13AQ9H1H9 1805 aa18.91■□□□□ 0.62
LINC00511-202ENST00000457958 KCNA4P22459 653 aa18.9■□□□□ 0.62
LINC00511-202ENST00000457958 CASKIN1Q8WXD9 1431 aa18.9■□□□□ 0.62
LINC00511-202ENST00000457958 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
LINC00511-202ENST00000457958 CFAP43Q8NDM7 1665 aa18.88■□□□□ 0.61
LINC00511-202ENST00000457958 HNRNPUL2Q1KMD3 747 aaKnown RBP18.87■□□□□ 0.61
LINC00511-202ENST00000457958 LRRC9Q6ZRR7 1453 aa18.86■□□□□ 0.61
LINC00511-202ENST00000457958 FHOD3Q2V2M9 1422 aa18.86■□□□□ 0.61
LINC00511-202ENST00000457958 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
LINC00511-202ENST00000457958 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.61
LINC00511-202ENST00000457958 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
LINC00511-202ENST00000457958 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
LINC00511-202ENST00000457958 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
LINC00511-202ENST00000457958 IQGAP2Q13576 1575 aa18.79■□□□□ 0.6
LINC00511-202ENST00000457958 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
LINC00511-202ENST00000457958 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
LINC00511-202ENST00000457958 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
LINC00511-202ENST00000457958 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC00511-202ENST00000457958 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
LINC00511-202ENST00000457958 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
LINC00511-202ENST00000457958 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
LINC00511-202ENST00000457958 UGGT2Q9NYU1 1516 aa18.72■□□□□ 0.59
LINC00511-202ENST00000457958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC00511-202ENST00000457958 KIAA0586Q9BVV6 1533 aa18.72■□□□□ 0.59
LINC00511-202ENST00000457958 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
LINC00511-202ENST00000457958 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
LINC00511-202ENST00000457958 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
LINC00511-202ENST00000457958 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
LINC00511-202ENST00000457958 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
LINC00511-202ENST00000457958 KDM6BO15054 1643 aa18.63■□□□□ 0.57
LINC00511-202ENST00000457958 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
LINC00511-202ENST00000457958 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
LINC00511-202ENST00000457958 PTPRGP23470 1445 aa18.6■□□□□ 0.57
LINC00511-202ENST00000457958 SUPT6HQ7KZ85 1726 aaKnown RBP18.59■□□□□ 0.57
LINC00511-202ENST00000457958 DHX57Q6P158 1386 aaKnown RBP18.59■□□□□ 0.57
LINC00511-202ENST00000457958 LRRIQ1Q96JM4 1722 aa18.58■□□□□ 0.57
LINC00511-202ENST00000457958 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
LINC00511-202ENST00000457958 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
LINC00511-202ENST00000457958 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
LINC00511-202ENST00000457958 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
LINC00511-202ENST00000457958 FOXD1Q16676 465 aa18.54■□□□□ 0.56
LINC00511-202ENST00000457958 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
LINC00511-202ENST00000457958 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
LINC00511-202ENST00000457958 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
LINC00511-202ENST00000457958 ABCC2Q92887 1545 aa18.53■□□□□ 0.56
LINC00511-202ENST00000457958 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
LINC00511-202ENST00000457958 ITGAEP38570 1179 aa18.52■□□□□ 0.56
LINC00511-202ENST00000457958 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
LINC00511-202ENST00000457958 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
LINC00511-202ENST00000457958 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
LINC00511-202ENST00000457958 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
LINC00511-202ENST00000457958 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
LINC00511-202ENST00000457958 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
LINC00511-202ENST00000457958 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
LINC00511-202ENST00000457958 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
LINC00511-202ENST00000457958 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.55
LINC00511-202ENST00000457958 GLI2P10070 1586 aa18.46■□□□□ 0.54
LINC00511-202ENST00000457958 MIA2Q96PC5 1412 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms