RNA–Protein interactions for RNA: ENST00000457855.1

BRPF1-206, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene BRPF1, Length 4,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-206ENST00000457855 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
BRPF1-206ENST00000457855 TDRD9Q8NDG6 1382 aaKnown RBP12.44□□□□□ -0.42
BRPF1-206ENST00000457855 FHAD1B1AJZ9 1412 aa12.44□□□□□ -0.42
BRPF1-206ENST00000457855 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
BRPF1-206ENST00000457855 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
BRPF1-206ENST00000457855 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
BRPF1-206ENST00000457855 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
BRPF1-206ENST00000457855 TONSLQ96HA7 1378 aa12.4□□□□□ -0.42
BRPF1-206ENST00000457855 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
BRPF1-206ENST00000457855 NBR1Q14596 966 aa12.39□□□□□ -0.43
BRPF1-206ENST00000457855 CFTRP13569 1480 aa12.38□□□□□ -0.43
BRPF1-206ENST00000457855 ANP32CO43423 234 aa12.38□□□□□ -0.43
BRPF1-206ENST00000457855 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
BRPF1-206ENST00000457855 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
BRPF1-206ENST00000457855 IGF1RP08069 1367 aa12.36□□□□□ -0.43
BRPF1-206ENST00000457855 MIER1Q8N108 512 aa12.36□□□□□ -0.43
BRPF1-206ENST00000457855 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
BRPF1-206ENST00000457855 FGD5Q6ZNL6 1462 aa12.35□□□□□ -0.43
BRPF1-206ENST00000457855 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
BRPF1-206ENST00000457855 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
BRPF1-206ENST00000457855 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
BRPF1-206ENST00000457855 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
BRPF1-206ENST00000457855 FKBP8Q14318 412 aa12.3□□□□□ -0.44
BRPF1-206ENST00000457855 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
BRPF1-206ENST00000457855 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
BRPF1-206ENST00000457855 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
BRPF1-206ENST00000457855 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
BRPF1-206ENST00000457855 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
BRPF1-206ENST00000457855 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
BRPF1-206ENST00000457855 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.44
BRPF1-206ENST00000457855 CUX1P39880 1505 aa12.27□□□□□ -0.45
BRPF1-206ENST00000457855 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
BRPF1-206ENST00000457855 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
BRPF1-206ENST00000457855 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
BRPF1-206ENST00000457855 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
BRPF1-206ENST00000457855 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
BRPF1-206ENST00000457855 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
BRPF1-206ENST00000457855 NESP48681 1621 aa12.23□□□□□ -0.45
BRPF1-206ENST00000457855 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
BRPF1-206ENST00000457855 DHX57Q6P158 1386 aaKnown RBP12.22□□□□□ -0.45
BRPF1-206ENST00000457855 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
BRPF1-206ENST00000457855 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
BRPF1-206ENST00000457855 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
BRPF1-206ENST00000457855 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
BRPF1-206ENST00000457855 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
BRPF1-206ENST00000457855 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
BRPF1-206ENST00000457855 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
BRPF1-206ENST00000457855 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
BRPF1-206ENST00000457855 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
BRPF1-206ENST00000457855 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
BRPF1-206ENST00000457855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.462e-7■■□□□ 13.3
BRPF1-206ENST00000457855 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
BRPF1-206ENST00000457855 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.47
BRPF1-206ENST00000457855 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.47
BRPF1-206ENST00000457855 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
BRPF1-206ENST00000457855 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
BRPF1-206ENST00000457855 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
BRPF1-206ENST00000457855 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
BRPF1-206ENST00000457855 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
BRPF1-206ENST00000457855 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
BRPF1-206ENST00000457855 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
BRPF1-206ENST00000457855 IRX6P78412 446 aaPredicted RBP12.12□□□□□ -0.47
BRPF1-206ENST00000457855 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
BRPF1-206ENST00000457855 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.477e-7■■■■■ 36.7
BRPF1-206ENST00000457855 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
BRPF1-206ENST00000457855 ARXQ96QS3 562 aa12.1□□□□□ -0.47
BRPF1-206ENST00000457855 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
BRPF1-206ENST00000457855 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
BRPF1-206ENST00000457855 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
BRPF1-206ENST00000457855 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
BRPF1-206ENST00000457855 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
BRPF1-206ENST00000457855 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
BRPF1-206ENST00000457855 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
BRPF1-206ENST00000457855 FOXD1Q16676 465 aa12.04□□□□□ -0.48
BRPF1-206ENST00000457855 CASKIN1Q8WXD9 1431 aa12.04□□□□□ -0.48
BRPF1-206ENST00000457855 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
BRPF1-206ENST00000457855 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
BRPF1-206ENST00000457855 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
BRPF1-206ENST00000457855 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
BRPF1-206ENST00000457855 MPHOSPH9Q99550 1183 aa12.03□□□□□ -0.48
BRPF1-206ENST00000457855 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
BRPF1-206ENST00000457855 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.48
BRPF1-206ENST00000457855 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.48
BRPF1-206ENST00000457855 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
BRPF1-206ENST00000457855 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
BRPF1-206ENST00000457855 MRS2Q9HD23 443 aa12.02□□□□□ -0.49
BRPF1-206ENST00000457855 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
BRPF1-206ENST00000457855 GRIN2BQ13224 1484 aa12.01□□□□□ -0.49
BRPF1-206ENST00000457855 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
BRPF1-206ENST00000457855 CYB5RLQ6IPT4 315 aa12□□□□□ -0.49
BRPF1-206ENST00000457855 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
BRPF1-206ENST00000457855 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
BRPF1-206ENST00000457855 PKD2Q13563 968 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
BRPF1-206ENST00000457855 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
BRPF1-206ENST00000457855 CCER2I3L3R5 266 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms