RNA–Protein interactions for RNA: ENST00000457754.6

RUFY4-203, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 2

Gene RUFY4, Length 3,568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-203ENST00000457754 CUX2O14529 1486 aa14.55□□□□□ -0.08
RUFY4-203ENST00000457754 RAB3GAP2Q9H2M9 1393 aa14.55□□□□□ -0.08
RUFY4-203ENST00000457754 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
RUFY4-203ENST00000457754 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
RUFY4-203ENST00000457754 ARAP1Q96P48 1450 aa14.49□□□□□ -0.09
RUFY4-203ENST00000457754 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
RUFY4-203ENST00000457754 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
RUFY4-203ENST00000457754 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
RUFY4-203ENST00000457754 SENP3-EIF4A1A0A087X0R7 540 aa14.44□□□□□ -0.1
RUFY4-203ENST00000457754 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
RUFY4-203ENST00000457754 CHIC2Q9UKJ5 165 aa14.41□□□□□ -0.1
RUFY4-203ENST00000457754 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
RUFY4-203ENST00000457754 NESP48681 1621 aa14.4□□□□□ -0.1
RUFY4-203ENST00000457754 SETD5Q9C0A6 1442 aa14.39□□□□□ -0.11
RUFY4-203ENST00000457754 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
RUFY4-203ENST00000457754 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
RUFY4-203ENST00000457754 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
RUFY4-203ENST00000457754 RRBP1Q9P2E9 1410 aaKnown RBP14.38□□□□□ -0.11
RUFY4-203ENST00000457754 POLR3GLQ9BT43 218 aa14.37□□□□□ -0.11
RUFY4-203ENST00000457754 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
RUFY4-203ENST00000457754 FAM9BQ8IZU0 186 aa14.37□□□□□ -0.11
RUFY4-203ENST00000457754 MSH5O43196 834 aa14.36□□□□□ -0.11
RUFY4-203ENST00000457754 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
RUFY4-203ENST00000457754 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
RUFY4-203ENST00000457754 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
RUFY4-203ENST00000457754 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
RUFY4-203ENST00000457754 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.11
RUFY4-203ENST00000457754 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
RUFY4-203ENST00000457754 ARHGAP35Q9NRY4 1499 aa14.32□□□□□ -0.12
RUFY4-203ENST00000457754 CC2D2AQ9P2K1 1620 aa14.32□□□□□ -0.12
RUFY4-203ENST00000457754 MYT1LQ9UL68 1186 aa14.32□□□□□ -0.12
RUFY4-203ENST00000457754 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
RUFY4-203ENST00000457754 MTUS2Q5JR59 1369 aa14.3□□□□□ -0.12
RUFY4-203ENST00000457754 NBR1Q14596 966 aa14.3□□□□□ -0.12
RUFY4-203ENST00000457754 IGF1RP08069 1367 aa14.3□□□□□ -0.12
RUFY4-203ENST00000457754 CCER2I3L3R5 266 aa14.29□□□□□ -0.12
RUFY4-203ENST00000457754 CFTRP13569 1480 aa14.29□□□□□ -0.12
RUFY4-203ENST00000457754 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
RUFY4-203ENST00000457754 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
RUFY4-203ENST00000457754 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.12
RUFY4-203ENST00000457754 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
RUFY4-203ENST00000457754 CUX1P39880 1505 aa14.27□□□□□ -0.13
RUFY4-203ENST00000457754 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
RUFY4-203ENST00000457754 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
RUFY4-203ENST00000457754 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
RUFY4-203ENST00000457754 FHOD3Q2V2M9 1422 aa14.24□□□□□ -0.13
RUFY4-203ENST00000457754 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
RUFY4-203ENST00000457754 CCDC184Q52MB2 194 aa14.23□□□□□ -0.13
RUFY4-203ENST00000457754 FOXD1Q16676 465 aa14.22□□□□□ -0.13
RUFY4-203ENST00000457754 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
RUFY4-203ENST00000457754 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
RUFY4-203ENST00000457754 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
RUFY4-203ENST00000457754 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.14
RUFY4-203ENST00000457754 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
RUFY4-203ENST00000457754 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
RUFY4-203ENST00000457754 LRRC9Q6ZRR7 1453 aa14.17□□□□□ -0.14
RUFY4-203ENST00000457754 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
RUFY4-203ENST00000457754 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
RUFY4-203ENST00000457754 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
RUFY4-203ENST00000457754 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
RUFY4-203ENST00000457754 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
RUFY4-203ENST00000457754 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.15
RUFY4-203ENST00000457754 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
RUFY4-203ENST00000457754 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
RUFY4-203ENST00000457754 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
RUFY4-203ENST00000457754 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
RUFY4-203ENST00000457754 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
RUFY4-203ENST00000457754 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
RUFY4-203ENST00000457754 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
RUFY4-203ENST00000457754 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
RUFY4-203ENST00000457754 C11orf95C9JLR9 678 aaPredicted RBP14.06□□□□□ -0.16
RUFY4-203ENST00000457754 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
RUFY4-203ENST00000457754 L3MBTL2Q969R5 705 aa14.06□□□□□ -0.16
RUFY4-203ENST00000457754 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
RUFY4-203ENST00000457754 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
RUFY4-203ENST00000457754 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
RUFY4-203ENST00000457754 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
RUFY4-203ENST00000457754 RTL5Q5HYW3 569 aaPredicted RBP14.04□□□□□ -0.16
RUFY4-203ENST00000457754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
RUFY4-203ENST00000457754 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
RUFY4-203ENST00000457754 CFDP1Q9UEE9 299 aaPredicted RBP14.02□□□□□ -0.17
RUFY4-203ENST00000457754 ANP32AP39687 249 aaKnown RBP14.01□□□□□ -0.17
RUFY4-203ENST00000457754 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
RUFY4-203ENST00000457754 PLEKHD1A6NEE1 506 aa14.01□□□□□ -0.17
RUFY4-203ENST00000457754 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
RUFY4-203ENST00000457754 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
RUFY4-203ENST00000457754 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
RUFY4-203ENST00000457754 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
RUFY4-203ENST00000457754 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
RUFY4-203ENST00000457754 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
RUFY4-203ENST00000457754 UACAQ9BZF9 1416 aa13.97□□□□□ -0.17
RUFY4-203ENST00000457754 JPH4Q96JJ6 628 aa13.97□□□□□ -0.17
RUFY4-203ENST00000457754 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
RUFY4-203ENST00000457754 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.17
RUFY4-203ENST00000457754 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
RUFY4-203ENST00000457754 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
RUFY4-203ENST00000457754 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
RUFY4-203ENST00000457754 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
RUFY4-203ENST00000457754 NBPF8Q3BBV2 869 aa13.94□□□□□ -0.18
RUFY4-203ENST00000457754 TMC1Q8TDI8 760 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms